Last updated on 2025-06-04 17:55:05 CEST.
| Package | ERROR | OK |
|---|---|---|
| clugenr | 13 | |
| micompr | 8 | 5 |
Current CRAN status: OK: 13
Current CRAN status: ERROR: 8, OK: 5
Version: 1.1.4
Check: examples
Result: ERROR
Running examples in ‘micompr-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: assumptions.cmpoutput
> ### Title: Get assumptions for parametric tests performed on output
> ### comparisons
> ### Aliases: assumptions.cmpoutput
>
> ### ** Examples
>
>
> # Create a cmpoutput object from the provided datasets
> cmp <- cmpoutput("All", 0.9, pphpc_ok$data[["All"]], pphpc_ok$obs_lvls)
>
> # Get the assumptions for the parametric tests performed in cmp
> acmp <- assumptions(cmp)
Error in MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston", :
unused arguments (mvnTest = "royston", univariateTest = "SW")
Calls: assumptions -> assumptions.cmpoutput -> assumptions_manova
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-release-linux-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [15s/20s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # Copyright (c) 2016 Nuno Fachada
> # Distributed under the MIT License (http://opensource.org/licenses/MIT)
>
> library(testthat)
>
> test_check("micompr")
Loading required package: micompr
[ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5
── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ──
Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston",
univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─micompr::assumptions_manova(bogus_data, factors)
── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3
2. └─micompr:::assumptions.cmpoutput(cmp)
3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3
2. └─micompr:::assumptions.micomp(mic1a)
3. └─base::lapply(obj, function(x) assumptions(x))
4. └─micompr (local) FUN(X[[i]], ...)
5. ├─micompr::assumptions(x)
6. └─micompr:::assumptions.cmpoutput(x)
7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
[ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘paper.Rnw’ using knitr
Quitting from paper.Rnw:340-342 [sunspot3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `MVN::mvn()`:
! unused arguments (mvnTest = "royston", univariateTest = "SW")
---
Backtrace:
x
1. +-micompr::assumptions(cmp)
2. \-micompr:::assumptions.cmpoutput(cmp)
3. \-micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'paper.Rnw' failed with diagnostics:
unused arguments (mvnTest = "royston", univariateTest = "SW")
--- failed re-building ‘paper.Rnw’
--- re-building ‘tolatex-examples.Rnw’ using knitr
--- finished re-building ‘tolatex-examples.Rnw’
SUMMARY: processing the following file failed:
‘paper.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-release-linux-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [9s/13s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # Copyright (c) 2016 Nuno Fachada
> # Distributed under the MIT License (http://opensource.org/licenses/MIT)
>
> library(testthat)
>
> test_check("micompr")
Loading required package: micompr
[ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5
── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ──
Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston",
univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─micompr::assumptions_manova(bogus_data, factors)
── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3
2. └─micompr:::assumptions.cmpoutput(cmp)
3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3
2. └─micompr:::assumptions.micomp(mic1a)
3. └─base::lapply(obj, function(x) assumptions(x))
4. └─micompr (local) FUN(X[[i]], ...)
5. ├─micompr::assumptions(x)
6. └─micompr:::assumptions.cmpoutput(x)
7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
[ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.4
Check: examples
Result: ERROR
Running examples in ‘micompr-Ex.R’ failed
The error most likely occurred in:
> ### Name: assumptions.cmpoutput
> ### Title: Get assumptions for parametric tests performed on output
> ### comparisons
> ### Aliases: assumptions.cmpoutput
>
> ### ** Examples
>
>
> # Create a cmpoutput object from the provided datasets
> cmp <- cmpoutput("All", 0.9, pphpc_ok$data[["All"]], pphpc_ok$obs_lvls)
>
> # Get the assumptions for the parametric tests performed in cmp
> acmp <- assumptions(cmp)
Error in MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston", :
unused arguments (mvnTest = "royston", univariateTest = "SW")
Calls: assumptions -> assumptions.cmpoutput -> assumptions_manova
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [25s/64s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # Copyright (c) 2016 Nuno Fachada
> # Distributed under the MIT License (http://opensource.org/licenses/MIT)
>
> library(testthat)
>
> test_check("micompr")
Loading required package: micompr
[ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5
── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ──
Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston",
univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─micompr::assumptions_manova(bogus_data, factors)
── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3
2. └─micompr:::assumptions.cmpoutput(cmp)
3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3
2. └─micompr:::assumptions.micomp(mic1a)
3. └─base::lapply(obj, function(x) assumptions(x))
4. └─micompr (local) FUN(X[[i]], ...)
5. ├─micompr::assumptions(x)
6. └─micompr:::assumptions.cmpoutput(x)
7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
[ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.1.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘paper.Rnw’ using knitr
Quitting from paper.Rnw:340-342 [sunspot3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `MVN::mvn()`:
! unused arguments (mvnTest = "royston", univariateTest = "SW")
---
Backtrace:
x
1. +-micompr::assumptions(cmp)
2. \-micompr:::assumptions.cmpoutput(cmp)
3. \-micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'paper.Rnw' failed with diagnostics:
unused arguments (mvnTest = "royston", univariateTest = "SW")
--- failed re-building ‘paper.Rnw’
--- re-building ‘tolatex-examples.Rnw’ using knitr
--- finished re-building ‘tolatex-examples.Rnw’
SUMMARY: processing the following file failed:
‘paper.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [20s/40s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # Copyright (c) 2016 Nuno Fachada
> # Distributed under the MIT License (http://opensource.org/licenses/MIT)
>
> library(testthat)
>
> test_check("micompr")
Loading required package: micompr
[ FAIL 4 | WARN 73 | SKIP 0 | PASS 287 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5
── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ──
Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston",
univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─micompr::assumptions_manova(bogus_data, factors)
── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3
2. └─micompr:::assumptions.cmpoutput(cmp)
3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3
2. └─micompr:::assumptions.micomp(mic1a)
3. └─base::lapply(obj, function(x) assumptions(x))
4. └─micompr (local) FUN(X[[i]], ...)
5. ├─micompr::assumptions(x)
6. └─micompr:::assumptions.cmpoutput(x)
7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
[ FAIL 4 | WARN 73 | SKIP 0 | PASS 287 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.1.4
Check: tests
Result: ERROR
Running 'testthat.R' [12s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # Copyright (c) 2016 Nuno Fachada
> # Distributed under the MIT License (http://opensource.org/licenses/MIT)
>
> library(testthat)
>
> test_check("micompr")
Loading required package: micompr
[ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5
── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ──
Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston",
univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─micompr::assumptions_manova(bogus_data, factors)
── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3
2. └─micompr:::assumptions.cmpoutput(cmp)
3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3
2. └─micompr:::assumptions.micomp(mic1a)
3. └─base::lapply(obj, function(x) assumptions(x))
4. └─micompr (local) FUN(X[[i]], ...)
5. ├─micompr::assumptions(x)
6. └─micompr:::assumptions.cmpoutput(x)
7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
[ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ]
Error: Test failures
Execution halted
Flavor: r-devel-windows-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [14s/18s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # Copyright (c) 2016 Nuno Fachada
> # Distributed under the MIT License (http://opensource.org/licenses/MIT)
>
> library(testthat)
>
> test_check("micompr")
Loading required package: micompr
[ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5
── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ──
Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston",
univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─micompr::assumptions_manova(bogus_data, factors)
── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3
2. └─micompr:::assumptions.cmpoutput(cmp)
3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3
2. └─micompr:::assumptions.micomp(mic1a)
3. └─base::lapply(obj, function(x) assumptions(x))
4. └─micompr (local) FUN(X[[i]], ...)
5. ├─micompr::assumptions(x)
6. └─micompr:::assumptions.cmpoutput(x)
7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
[ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ]
Error: Test failures
Execution halted
Flavor: r-release-linux-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running 'testthat.R' [11s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # Copyright (c) 2016 Nuno Fachada
> # Distributed under the MIT License (http://opensource.org/licenses/MIT)
>
> library(testthat)
>
> test_check("micompr")
Loading required package: micompr
[ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5
── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ──
Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston",
univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─micompr::assumptions_manova(bogus_data, factors)
── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3
2. └─micompr:::assumptions.cmpoutput(cmp)
3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3
2. └─micompr:::assumptions.micomp(mic1a)
3. └─base::lapply(obj, function(x) assumptions(x))
4. └─micompr (local) FUN(X[[i]], ...)
5. ├─micompr::assumptions(x)
6. └─micompr:::assumptions.cmpoutput(x)
7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
[ FAIL 4 | WARN 62 | SKIP 0 | PASS 287 ]
Error: Test failures
Execution halted
Flavor: r-release-windows-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running 'testthat.R' [18s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # Copyright (c) 2016 Nuno Fachada
> # Distributed under the MIT License (http://opensource.org/licenses/MIT)
>
> library(testthat)
>
> test_check("micompr")
Loading required package: micompr
[ FAIL 4 | WARN 73 | SKIP 0 | PASS 287 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_assumptions.R:25:5'): assumptions_manova constructs the expected objects ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. └─micompr::assumptions_manova(iris[, 1:4], iris[, 5]) at test_assumptions.R:25:5
── Error ('test_assumptions.R:59:5'): assumptions_manova throws the expected warnings ──
Error in `MVN::mvn(data[fidx, 1:min(nobs - 1, nvars)], mvnTest = "royston",
univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test_assumptions.R:59:5
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─micompr::assumptions_manova(bogus_data, factors)
── Error ('test_cmpoutput.R:214:3'): assumptions.cmpoutput creates the correct object ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(cmp) at test_cmpoutput.R:214:3
2. └─micompr:::assumptions.cmpoutput(cmp)
3. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
── Error ('test_micomp.R:281:3'): micomp assumptions have the correct properties ──
Error in `MVN::mvn(data[fidx, ], mvnTest = "royston", univariateTest = "SW")`: unused arguments (mvnTest = "royston", univariateTest = "SW")
Backtrace:
▆
1. ├─micompr::assumptions(mic1a) at test_micomp.R:281:3
2. └─micompr:::assumptions.micomp(mic1a)
3. └─base::lapply(obj, function(x) assumptions(x))
4. └─micompr (local) FUN(X[[i]], ...)
5. ├─micompr::assumptions(x)
6. └─micompr:::assumptions.cmpoutput(x)
7. └─micompr::assumptions_manova(scores[, 1:npcs[i]], obs_lvls)
[ FAIL 4 | WARN 73 | SKIP 0 | PASS 287 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-x86_64
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