CRAN Package Check Results for Maintainer ‘Erik W Leppo <Erik.Leppo at tetratech.com>’

Last updated on 2025-12-28 01:49:08 CET.

Package	ERROR	NOTE	OK
baytrends	1	1	11
BioMonTools	1		12

Package baytrends

Current CRAN status: ERROR: 1, NOTE: 1, OK: 11

Version: 2.0.12
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Erik W Leppo <Erik.Leppo@tetratech.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = "Rebecca", family = "Murphy", role = "aut"), person(given = "Elgin", family = "Perry", role = "aut"), person(given = "Jennifer", family = "Keisman", role = "aut"), person(given = "Jon", family = "Harcum", role = "aut"), person(given = c("Erik", "W"), family = "Leppo", role = c("aut", "cre"), email = "erik.leppo@tetratech.com")) as necessary. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 2.0.12
Check: examples
Result: ERROR Running examples in ‘baytrends-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: getUSGSflow > ### Title: Retrieve USGS daily flow data in a wide format > ### Aliases: getUSGSflow > ### Keywords: internal > > ### ** Examples > > # set retrieval parameters > yearStart <- 2014 > yearEnd <- 2014 > siteNumber <- c('01578310') > > # regular retrieval (default usage) > df <- getUSGSflow(siteNumber, yearStart, yearEnd) Warning in dataRetrieval::readNWISdv(siteNumber[i], parameterCd, dateStart, : NWIS servers are slated for decommission. Please begin to migrate to read_waterdata_daily. GET: https://waterservices.usgs.gov/nwis/dv/?site=01578310&format=waterml%2C1.1&ParameterCd=00060&StatCd=00003&startDT=2014-01-01&endDT=2014-12-31 Error in `httr2::req_perform()`: ! Failed to perform HTTP request. Caused by error in `curl::curl_fetch_memory()`: ! Timeout was reached [waterservices.usgs.gov]: Connection timed out after 10002 milliseconds Backtrace: ▆ 1. └─baytrends::getUSGSflow(siteNumber, yearStart, yearEnd) 2. └─dataRetrieval::readNWISdv(...) 3. └─dataRetrieval::importWaterML1(url, asDateTime = FALSE) 4. └─dataRetrieval:::check_if_xml(obs_url) 5. └─dataRetrieval::getWebServiceData(obs_url) 6. └─httr2::req_perform(obs_url) 7. └─httr2:::handle_resp(req, resp, error_call = error_call) 8. └─rlang::cnd_signal(resp) Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Package BioMonTools

Current CRAN status: ERROR: 1, OK: 12

Version: 1.2.4
Check: examples
Result: ERROR Running examples in 'BioMonTools-Ex.R' failed The error most likely occurred in: > ### Name: qc_taxa > ### Title: Quality Control Check on User Data Against Master Taxa List > ### Aliases: qc_taxa > > ### ** Examples > > # Example 1, Master Taxa List, Bugs > url_mt_bugs <- "https://github.com/leppott/MBSStools_SupportFiles/raw/master/Data/CHAR_Bugs.csv" > df_mt_bugs <- read.csv(url_mt_bugs) > > # User data > DF_User <- data_benthos_MBSS > DF_Official <- NULL # NULL df_mt_bugs > fun.Community <- "bugs" > useOfficialTaxaInfo <- "only_Official" > # modify taxa id column > DF_User[, "TAXON"] <- DF_User[, "TAXAID"] > > df_qc_taxa_bugs <- qc_taxa(DF_User, + DF_Official, + fun.Community, + useOfficialTaxaInfo) Warning in file(file, "rt") : URL 'https://github.com/leppott/MBSStools_SupportFiles/raw/master/Data/CHAR_Bugs.csv': status was 'Server returned nothing (no headers, no data)' Error in file(file, "rt") : cannot open the connection to 'https://github.com/leppott/MBSStools_SupportFiles/raw/master/Data/CHAR_Bugs.csv' Calls: qc_taxa -> <Anonymous> -> read.table -> file Execution halted Flavor: r-oldrel-windows-x86_64