CRAN Package Check Results for Maintainer ‘Daniele Bizzarri <d.bizzarri at lumc.nl>’

Last updated on 2025-10-10 15:50:12 CEST.

Package	ERROR	OK
MiMIR	9	4

Package MiMIR

Current CRAN status: ERROR: 9, OK: 4

Version: 1.5
Check: examples
Result: ERROR Running examples in ‘MiMIR-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: MetaboWAS > ### Title: MetaboWAS > ### Aliases: MetaboWAS > > ### ** Examples > > require(MiMIR) > require(plotly) Loading required package: plotly Loading required package: ggplot2 Attaching package: ‘plotly’ The following object is masked from ‘package:ggplot2’: last_plot The following object is masked from ‘package:stats’: filter The following object is masked from ‘package:graphics’: layout > require(ggplot2) > > #' #load the dataset > metabolic_measures <- synthetic_metabolic_dataset > phenotypes <- synthetic_phenotypic_dataset > > #Computing a MetaboWAS for age corrected by sex > MetaboWAS(met=metabolic_measures, pheno=phenotypes, test_variable="age", covariates= "sex") Error in `ggplot2::scale_y_continuous()`: ! `limits` must be a vector of length 2, not length 7. Backtrace: ▆ 1. └─MiMIR::MetaboWAS(...) 2. └─ggplot2::scale_y_continuous(expand = c(0, 0), limits = c(0, ylim)) 3. └─ggplot2::continuous_scale(...) 4. └─ggplot2:::check_continuous_limits(limits, call = call) 5. └─ggplot2:::check_length(limits, 2L, arg = arg, call = call) 6. └─cli::cli_abort(msg, call = call, arg = arg) 7. └─rlang::abort(...) Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.5
Check: examples
Result: ERROR Running examples in ‘MiMIR-Ex.R’ failed The error most likely occurred in: > ### Name: MetaboWAS > ### Title: MetaboWAS > ### Aliases: MetaboWAS > > ### ** Examples > > require(MiMIR) > require(plotly) Loading required package: plotly Loading required package: ggplot2 Attaching package: ‘plotly’ The following object is masked from ‘package:ggplot2’: last_plot The following object is masked from ‘package:stats’: filter The following object is masked from ‘package:graphics’: layout > require(ggplot2) > > #' #load the dataset > metabolic_measures <- synthetic_metabolic_dataset > phenotypes <- synthetic_phenotypic_dataset > > #Computing a MetaboWAS for age corrected by sex > MetaboWAS(met=metabolic_measures, pheno=phenotypes, test_variable="age", covariates= "sex") Error in `ggplot2::scale_y_continuous()`: ! `limits` must be a vector of length 2, not length 7. Backtrace: ▆ 1. └─MiMIR::MetaboWAS(...) 2. └─ggplot2::scale_y_continuous(expand = c(0, 0), limits = c(0, ylim)) 3. └─ggplot2::continuous_scale(...) 4. └─ggplot2:::check_continuous_limits(limits, call = call) 5. └─ggplot2:::check_length(limits, 2L, arg = arg, call = call) 6. └─cli::cli_abort(msg, call = call, arg = arg) 7. └─rlang::abort(...) Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64