CRAN Package Check Results for Maintainer ‘Boyu Ren <bren at mgb.org>’

Last updated on 2025-12-28 01:49:04 CET.

Package	ERROR	OK
GPCERF	9	4

Package GPCERF

Current CRAN status: ERROR: 9, OK: 4

Version: 0.2.4
Check: DESCRIPTION meta-information
Result: NOTE Author field differs from that derived from Authors@R Author: ‘Naeem Khoshnevis [aut] (<https://orcid.org/0000-0003-4315-1426>, HUIT), Boyu Ren [aut, cre] (<https://orcid.org/0000-0002-5300-1184>, McLean Hospital), Tanujit Dey [ctb] (<https://orcid.org/0000-0001-5559-211X>, HMS), Danielle Braun [aut] (<https://orcid.org/0000-0002-5177-8598>, HSPH)’ Authors@R: ‘Naeem Khoshnevis [aut] (ORCID: <https://orcid.org/0000-0003-4315-1426>, AFFILIATION: HUIT), Boyu Ren [aut, cre] (ORCID: <https://orcid.org/0000-0002-5300-1184>, AFFILIATION: McLean Hospital), Tanujit Dey [ctb] (ORCID: <https://orcid.org/0000-0001-5559-211X>, AFFILIATION: HMS), Danielle Braun [aut] (ORCID: <https://orcid.org/0000-0002-5177-8598>, AFFILIATION: HSPH)’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.2.4
Check: tests
Result: ERROR Running ‘testthat.R’ [128s/134s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(GPCERF) > > test_check("GPCERF") 2025-12-25 17:37:30.81575 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... Loading required package: nnls Saving _problems/test-compute_deriv_nn-21.R 2025-12-25 17:37:35.348998 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_deriv_weights_gp-17.R 2025-12-25 17:37:39.136248 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_m_sigma-32.R 2025-12-25 17:37:47.305633 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:37:51.225448 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:37:55.018407 gimli2 1097491 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=1105294 on localhost:11994 at 17:37:55.353 2025-12-25 17:37:59.42045 gimli2 1097491 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 4.402 s. 2025-12-25 17:37:59.46593 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:38:03.149663 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:38:06.744652 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_weight_gp-49.R 2025-12-25 17:38:10.925557 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:38:14.636906 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:38:18.48831 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:38:21.008209 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:38:21.050573 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:38:24.689993 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:38:24.709002 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:38:24.730425 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:38:24.76524 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:38:24.804397 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:38:24.845599 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:38:24.885033 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:38:25.037045 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:38:28.647655 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 starting worker pid=1112947 on localhost:11994 at 17:38:29.093 starting worker pid=1112946 on localhost:11994 at 17:38:29.124 2025-12-25 17:38:37.866322 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:38:42.285972 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:38:42.299581 gimli2 1097491 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-25 17:38:42.308606 gimli2 1097491 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=1116805 on localhost:11994 at 17:38:42.829 2025-12-25 17:38:47.277465 gimli2 1097491 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 4.96300000000001 s.} ... 2025-12-25 17:38:47.280491 gimli2 1097491 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=1118157 on localhost:11994 at 17:38:47.723 2025-12-25 17:38:51.522121 gimli2 1097491 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 4.242 s. 2025-12-25 17:38:51.52898 gimli2 1097491 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=1119207 on localhost:11994 at 17:38:51.957 2025-12-25 17:38:58.013857 gimli2 1097491 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 6.48899999999999 s. 2025-12-25 17:38:58.016311 gimli2 1097491 GPCERF estimate_cerf_nngp INFO: Done with estimating cerf using nngp approach Wall clock time: 15.717 s. 2025-12-25 17:38:58.026569 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:38:58.03619 gimli2 1097491 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-25 17:38:58.074757 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:38:58.087438 gimli2 1097491 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-25 17:38:58.16663 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:38:58.17647 gimli2 1097491 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-25 17:38:58.203394 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:39:00.527213 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:39:00.541071 gimli2 1097491 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-25 17:39:00.568949 gimli2 1097491 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-24 r89227), detected cores: 32 2025-12-25 17:39:00.581659 gimli2 1097491 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-25 17:39:00.617618 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-estimate_gps-15.R 2025-12-25 17:39:04.542085 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:39:08.104996 gimli2 1097491 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=1123457 on localhost:11994 at 17:39:08.488 2025-12-25 17:39:12.66418 gimli2 1097491 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 4.559 s. 2025-12-25 17:39:12.666591 gimli2 1097491 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=1124807 on localhost:11994 at 17:39:13.014 2025-12-25 17:39:17.290832 gimli2 1097491 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 4.624 s. Saving _problems/test-estimate_mean_sd_nn-37.R 2025-12-25 17:39:17.354932 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:39:19.672784 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:39:23.535813 gimli2 1097491 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=1127817 on localhost:11994 at 17:39:23.972 2025-12-25 17:39:27.645303 gimli2 1097491 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 4.10899999999999 s. 2025-12-25 17:39:27.706303 gimli2 1097491 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 17:39:31.727827 gimli2 1097491 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=1130628 on localhost:11994 at 17:39:32.132 2025-12-25 17:39:38.391339 gimli2 1097491 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 6.66200000000001 s.} ... [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-compute_deriv_nn.R:21:3'): compute_deriv_nn works as expected! ── Expected `deriv_val[1, 1]` to equal 1.558466. Differences: `actual`: -1.0 `expected`: 1.6 ── Failure ('test-compute_deriv_weights_gp.R:17:3'): compute_deriv_weights_gp works as expected! ── Expected `weights[37]` to equal 3.307249e-05. Differences: `actual`: -0.00011 `expected`: 0.00003 ── Failure ('test-compute_m_sigma.R:32:4'): compute_m_sigma works as expected! ── Expected `gp_cerf[10]` to equal 2.105425. Differences: `actual`: -6.1 `expected`: 2.1 ── Failure ('test-compute_weight_gp.R:49:3'): multiplication works ───────────── Expected `weight$weight[28]` to equal 0.0002182767. Differences: `actual`: 0.00000 `expected`: 0.00022 ── Failure ('test-estimate_gps.R:15:3'): estimate_gps works as expected. ─────── Expected `gps_m$gps[4, 1]` to equal 8.74310154. Differences: `actual`: 7.3 `expected`: 8.7 ── Failure ('test-estimate_mean_sd_nn.R:37:3'): estimate_mean_sd_nn works as expected! ── Expected `val[10]` to equal 5.031225. Differences: `actual`: 5.067 `expected`: 5.031 [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.2.4
Check: tests
Result: ERROR Running ‘testthat.R’ [72s/101s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(GPCERF) > > test_check("GPCERF") 2025-12-27 13:24:03.993717 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... Loading required package: nnls Saving _problems/test-compute_deriv_nn-21.R 2025-12-27 13:24:08.485692 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_deriv_weights_gp-17.R 2025-12-27 13:24:12.106765 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_m_sigma-32.R 2025-12-27 13:24:17.781682 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:24:20.883537 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:24:24.380453 gimli1 1282529 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=1300154 on localhost:11292 at 13:24:24.704 2025-12-27 13:24:26.977822 gimli1 1282529 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 2.598 s. 2025-12-27 13:24:27.031385 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:24:30.231757 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:24:33.258945 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_weight_gp-49.R 2025-12-27 13:24:37.555163 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:24:40.476579 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:24:42.532582 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:24:44.888242 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:24:44.923049 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:24:48.366812 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:24:48.395428 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:24:48.424807 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:24:48.45689 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:24:48.483408 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:24:48.515891 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:24:48.549745 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:24:48.584151 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:24:51.893603 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 starting worker pid=1323095 on localhost:11292 at 13:24:52.250 starting worker pid=1323096 on localhost:11292 at 13:24:52.308 2025-12-27 13:24:57.388757 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:25:00.583851 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:25:00.597869 gimli1 1282529 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-27 13:25:00.605049 gimli1 1282529 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=1331523 on localhost:11292 at 13:25:01.037 2025-12-27 13:25:04.009169 gimli1 1282529 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 3.403 s.} ... 2025-12-27 13:25:04.011205 gimli1 1282529 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=1334825 on localhost:11292 at 13:25:04.297 2025-12-27 13:25:06.652157 gimli1 1282529 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 2.64099999999999 s. 2025-12-27 13:25:06.654252 gimli1 1282529 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=1337676 on localhost:11292 at 13:25:06.966 2025-12-27 13:25:09.894333 gimli1 1282529 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 3.23999999999999 s. 2025-12-27 13:25:09.896288 gimli1 1282529 GPCERF estimate_cerf_nngp INFO: Done with estimating cerf using nngp approach Wall clock time: 9.29799999999999 s. 2025-12-27 13:25:09.901411 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:25:09.917627 gimli1 1282529 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-27 13:25:09.935841 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:25:09.953684 gimli1 1282529 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-27 13:25:10.008918 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:25:10.057178 gimli1 1282529 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-27 13:25:10.08526 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:25:12.429801 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:25:12.444536 gimli1 1282529 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-27 13:25:12.461338 gimli1 1282529 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R Under development (unstable) (2025-12-26 r89238), detected cores: 64 2025-12-27 13:25:12.476707 gimli1 1282529 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-27 13:25:12.50549 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-estimate_gps-15.R 2025-12-27 13:25:15.620113 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:25:19.621243 gimli1 1282529 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=1347080 on localhost:11292 at 13:25:19.896 2025-12-27 13:25:22.38005 gimli1 1282529 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 2.759 s. 2025-12-27 13:25:22.381865 gimli1 1282529 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=1348816 on localhost:11292 at 13:25:22.775 2025-12-27 13:25:25.888666 gimli1 1282529 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 3.50700000000001 s. Saving _problems/test-estimate_mean_sd_nn-37.R 2025-12-27 13:25:25.930932 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:25:28.297944 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:25:31.21196 gimli1 1282529 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=1356259 on localhost:11292 at 13:25:31.509 2025-12-27 13:25:33.975901 gimli1 1282529 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 2.76400000000001 s. 2025-12-27 13:25:33.995134 gimli1 1282529 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 13:25:37.297732 gimli1 1282529 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=1362346 on localhost:11292 at 13:25:37.499 2025-12-27 13:25:41.187675 gimli1 1282529 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 3.889 s.} ... [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-compute_deriv_nn.R:21:3'): compute_deriv_nn works as expected! ── Expected `deriv_val[1, 1]` to equal 1.558466. Differences: `actual`: -1.0 `expected`: 1.6 ── Failure ('test-compute_deriv_weights_gp.R:17:3'): compute_deriv_weights_gp works as expected! ── Expected `weights[37]` to equal 3.307249e-05. Differences: `actual`: -0.00011 `expected`: 0.00003 ── Failure ('test-compute_m_sigma.R:32:4'): compute_m_sigma works as expected! ── Expected `gp_cerf[10]` to equal 2.105425. Differences: `actual`: -6.1 `expected`: 2.1 ── Failure ('test-compute_weight_gp.R:49:3'): multiplication works ───────────── Expected `weight$weight[28]` to equal 0.0002182767. Differences: `actual`: 0.00000 `expected`: 0.00022 ── Failure ('test-estimate_gps.R:15:3'): estimate_gps works as expected. ─────── Expected `gps_m$gps[4, 1]` to equal 8.74310154. Differences: `actual`: 7.3 `expected`: 8.7 ── Failure ('test-estimate_mean_sd_nn.R:37:3'): estimate_mean_sd_nn works as expected! ── Expected `val[10]` to equal 5.031225. Differences: `actual`: 5.067 `expected`: 5.031 [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.2.4
Check: tests
Result: ERROR Running ‘testthat.R’ [145s/444s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(GPCERF) > > test_check("GPCERF") 2025-12-26 22:49:08.4103 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... Loading required package: nnls Saving _problems/test-compute_deriv_nn-21.R 2025-12-26 22:49:24.530401 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_deriv_weights_gp-17.R 2025-12-26 22:49:36.110408 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_m_sigma-32.R 2025-12-26 22:50:02.79345 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:50:13.784366 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:50:28.8768 gannet.stats.ox.ac.uk 622140 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=627396 on localhost:11507 at 22:50:29.471 2025-12-26 22:50:42.152785 gannet.stats.ox.ac.uk 622140 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 13.276 s. 2025-12-26 22:50:42.419077 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:50:55.679208 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:51:07.701552 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_weight_gp-49.R 2025-12-26 22:51:19.569707 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:51:32.756306 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:51:44.448699 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:51:52.77544 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:51:52.858649 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:52:08.270106 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:52:08.316254 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:52:08.35639 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:52:08.396866 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:52:08.467737 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:52:08.497675 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:52:08.565941 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:52:08.646268 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:52:23.496615 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 starting worker pid=634692 on localhost:11507 at 22:52:24.242 starting worker pid=634693 on localhost:11507 at 22:52:24.504 2025-12-26 22:52:53.845146 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:53:06.752936 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:53:06.782396 gannet.stats.ox.ac.uk 622140 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-26 22:53:06.811966 gannet.stats.ox.ac.uk 622140 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=636813 on localhost:11507 at 22:53:07.285 2025-12-26 22:53:21.398103 gannet.stats.ox.ac.uk 622140 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 14.574 s.} ... 2025-12-26 22:53:21.406602 gannet.stats.ox.ac.uk 622140 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=637217 on localhost:11507 at 22:53:22.280 2025-12-26 22:53:37.428914 gannet.stats.ox.ac.uk 622140 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 16.022 s. 2025-12-26 22:53:37.437695 gannet.stats.ox.ac.uk 622140 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=637846 on localhost:11507 at 22:53:38.437 2025-12-26 22:53:57.123574 gannet.stats.ox.ac.uk 622140 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 19.686 s. 2025-12-26 22:53:57.131742 gannet.stats.ox.ac.uk 622140 GPCERF estimate_cerf_nngp INFO: Done with estimating cerf using nngp approach Wall clock time: 50.349 s. 2025-12-26 22:53:57.153689 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:53:57.198775 gannet.stats.ox.ac.uk 622140 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-26 22:53:57.281587 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:53:57.322799 gannet.stats.ox.ac.uk 622140 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-26 22:53:57.656408 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:53:57.698889 gannet.stats.ox.ac.uk 622140 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-26 22:53:57.784009 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:54:06.698689 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:54:06.728137 gannet.stats.ox.ac.uk 622140 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-26 22:54:06.801253 gannet.stats.ox.ac.uk 622140 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 22:54:06.836365 gannet.stats.ox.ac.uk 622140 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-26 22:54:07.032869 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-estimate_gps-15.R 2025-12-26 22:54:16.907442 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:54:33.277739 gannet.stats.ox.ac.uk 622140 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=639666 on localhost:11507 at 22:54:34.444 2025-12-26 22:54:47.260752 gannet.stats.ox.ac.uk 622140 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 13.9829999999999 s. 2025-12-26 22:54:47.276225 gannet.stats.ox.ac.uk 622140 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=639896 on localhost:11507 at 22:54:48.609 2025-12-26 22:55:04.743584 gannet.stats.ox.ac.uk 622140 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 17.467 s. Saving _problems/test-estimate_mean_sd_nn-37.R 2025-12-26 22:55:05.118037 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:55:16.083339 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:55:33.816705 gannet.stats.ox.ac.uk 622140 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=641447 on localhost:11507 at 22:55:35.264 2025-12-26 22:55:46.365098 gannet.stats.ox.ac.uk 622140 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 12.548 s. 2025-12-26 22:55:46.506912 gannet.stats.ox.ac.uk 622140 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 22:55:57.147409 gannet.stats.ox.ac.uk 622140 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=642520 on localhost:11507 at 22:55:58.115 2025-12-26 22:56:13.640608 gannet.stats.ox.ac.uk 622140 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 16.49 s.} ... [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-compute_deriv_nn.R:21:3'): compute_deriv_nn works as expected! ── Expected `deriv_val[1, 1]` to equal 1.558466. Differences: `actual`: -1.0 `expected`: 1.6 ── Failure ('test-compute_deriv_weights_gp.R:17:3'): compute_deriv_weights_gp works as expected! ── Expected `weights[37]` to equal 3.307249e-05. Differences: `actual`: -0.00011 `expected`: 0.00003 ── Failure ('test-compute_m_sigma.R:32:4'): compute_m_sigma works as expected! ── Expected `gp_cerf[10]` to equal 2.105425. Differences: `actual`: -6.1 `expected`: 2.1 ── Failure ('test-compute_weight_gp.R:49:3'): multiplication works ───────────── Expected `weight$weight[28]` to equal 0.0002182767. Differences: `actual`: 0.00000 `expected`: 0.00022 ── Failure ('test-estimate_gps.R:15:3'): estimate_gps works as expected. ─────── Expected `gps_m$gps[4, 1]` to equal 8.74310154. Differences: `actual`: 7.3 `expected`: 8.7 ── Failure ('test-estimate_mean_sd_nn.R:37:3'): estimate_mean_sd_nn works as expected! ── Expected `val[10]` to equal 5.031225. Differences: `actual`: 5.067 `expected`: 5.031 [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.2.4
Check: tests
Result: ERROR Running ‘testthat.R’ [81s/120s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(GPCERF) > > test_check("GPCERF") 2025-12-26 21:33:55.840385 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... Loading required package: nnls Saving _problems/test-compute_deriv_nn-21.R 2025-12-26 21:34:00.052228 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_deriv_weights_gp-17.R 2025-12-26 21:34:03.902132 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_m_sigma-32.R 2025-12-26 21:34:10.884909 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:34:14.564908 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:34:18.318578 gannet.stats.ox.ac.uk 351565 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=352362 on localhost:11272 at 21:34:18.559 2025-12-26 21:34:21.898304 gannet.stats.ox.ac.uk 351565 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 3.58 s. 2025-12-26 21:34:21.977029 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:34:25.689109 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:34:29.421248 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_weight_gp-49.R 2025-12-26 21:34:33.276237 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:34:36.881544 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:34:39.945741 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:34:42.519772 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:34:42.572495 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:34:46.183951 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:34:46.20463 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:34:46.224972 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:34:46.288745 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:34:46.307164 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:34:46.337418 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:34:46.356911 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:34:46.390907 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:34:50.330351 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 starting worker pid=353309 on localhost:11272 at 21:34:50.585 starting worker pid=353308 on localhost:11272 at 21:34:50.695 2025-12-26 21:34:59.152366 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:35:02.81662 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:35:02.825443 gannet.stats.ox.ac.uk 351565 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-26 21:35:02.829801 gannet.stats.ox.ac.uk 351565 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=353684 on localhost:11272 at 21:35:03.055 2025-12-26 21:35:06.872823 gannet.stats.ox.ac.uk 351565 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 4.04100000000001 s.} ... 2025-12-26 21:35:06.876792 gannet.stats.ox.ac.uk 351565 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=354064 on localhost:11272 at 21:35:07.102 2025-12-26 21:35:10.378599 gannet.stats.ox.ac.uk 351565 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 3.50200000000001 s. 2025-12-26 21:35:10.382573 gannet.stats.ox.ac.uk 351565 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=354193 on localhost:11272 at 21:35:10.607 2025-12-26 21:35:14.844632 gannet.stats.ox.ac.uk 351565 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 4.462 s. 2025-12-26 21:35:14.847958 gannet.stats.ox.ac.uk 351565 GPCERF estimate_cerf_nngp INFO: Done with estimating cerf using nngp approach Wall clock time: 12.022 s. 2025-12-26 21:35:14.854364 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:35:14.864361 gannet.stats.ox.ac.uk 351565 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-26 21:35:14.888284 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:35:14.898342 gannet.stats.ox.ac.uk 351565 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-26 21:35:14.948302 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:35:14.957616 gannet.stats.ox.ac.uk 351565 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-26 21:35:14.969902 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:35:17.484851 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:35:17.498242 gannet.stats.ox.ac.uk 351565 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-26 21:35:17.542117 gannet.stats.ox.ac.uk 351565 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: ripley, R Under development (unstable) (2025-12-26 r89238), detected cores: 24 2025-12-26 21:35:17.554885 gannet.stats.ox.ac.uk 351565 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-26 21:35:17.594354 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-estimate_gps-15.R 2025-12-26 21:35:21.310148 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:35:24.969155 gannet.stats.ox.ac.uk 351565 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=354405 on localhost:11272 at 21:35:25.203 2025-12-26 21:35:28.587647 gannet.stats.ox.ac.uk 351565 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 3.61799999999999 s. 2025-12-26 21:35:28.589926 gannet.stats.ox.ac.uk 351565 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=354464 on localhost:11272 at 21:35:28.817 2025-12-26 21:35:32.682988 gannet.stats.ox.ac.uk 351565 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 4.093 s. Saving _problems/test-estimate_mean_sd_nn-37.R 2025-12-26 21:35:32.749885 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:35:35.317426 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:35:38.918335 gannet.stats.ox.ac.uk 351565 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=354731 on localhost:11272 at 21:35:39.219 2025-12-26 21:35:42.573676 gannet.stats.ox.ac.uk 351565 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 3.655 s. 2025-12-26 21:35:42.60984 gannet.stats.ox.ac.uk 351565 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-26 21:35:46.405771 gannet.stats.ox.ac.uk 351565 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=354905 on localhost:11272 at 21:35:46.642 2025-12-26 21:35:51.242068 gannet.stats.ox.ac.uk 351565 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 4.833 s.} ... [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-compute_deriv_nn.R:21:3'): compute_deriv_nn works as expected! ── Expected `deriv_val[1, 1]` to equal 1.558466. Differences: `actual`: -1.0 `expected`: 1.6 ── Failure ('test-compute_deriv_weights_gp.R:17:3'): compute_deriv_weights_gp works as expected! ── Expected `weights[37]` to equal 3.307249e-05. Differences: `actual`: -0.00011 `expected`: 0.00003 ── Failure ('test-compute_m_sigma.R:32:4'): compute_m_sigma works as expected! ── Expected `gp_cerf[10]` to equal 2.105425. Differences: `actual`: -6.1 `expected`: 2.1 ── Failure ('test-compute_weight_gp.R:49:3'): multiplication works ───────────── Expected `weight$weight[28]` to equal 0.0002182767. Differences: `actual`: 0.00000 `expected`: 0.00022 ── Failure ('test-estimate_gps.R:15:3'): estimate_gps works as expected. ─────── Expected `gps_m$gps[4, 1]` to equal 8.74310154. Differences: `actual`: 7.3 `expected`: 8.7 ── Failure ('test-estimate_mean_sd_nn.R:37:3'): estimate_mean_sd_nn works as expected! ── Expected `val[10]` to equal 5.031225. Differences: `actual`: 5.067 `expected`: 5.031 [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.2.4
Check: tests
Result: ERROR Running 'testthat.R' [140s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(GPCERF) > > test_check("GPCERF") 2025-12-24 08:23:44.583427 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... Loading required package: nnls Saving _problems/test-compute_deriv_nn-21.R 2025-12-24 08:23:50.820481 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_deriv_weights_gp-17.R 2025-12-24 08:23:56.062171 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_m_sigma-32.R 2025-12-24 08:24:04.752172 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:24:09.930307 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:24:15.496121 CRANWIN3 44776 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=48452 on localhost:11262 at 08:24:15.783 2025-12-24 08:24:18.530537 CRANWIN3 44776 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 3.05 s. 2025-12-24 08:24:18.580364 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:24:23.505547 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:24:28.677678 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_weight_gp-49.R 2025-12-24 08:24:34.192495 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:24:39.507793 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:24:43.075487 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:24:47.013037 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:24:47.023463 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:24:52.121191 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:24:52.132376 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:24:52.142998 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:24:52.153199 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:24:52.166621 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:24:52.179973 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:24:52.194741 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:24:52.210753 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:24:57.532299 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 starting worker pid=78984 on localhost:11262 at 08:24:57.766 starting worker pid=95900 on localhost:11262 at 08:24:57.804 2025-12-24 08:25:04.424629 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:25:09.56279 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:25:09.565193 CRANWIN3 44776 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 08:25:09.568697 CRANWIN3 44776 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=42840 on localhost:11262 at 08:25:09.832 2025-12-24 08:25:12.558002 CRANWIN3 44776 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 2.98 s.} ... 2025-12-24 08:25:12.560803 CRANWIN3 44776 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=70424 on localhost:11262 at 08:25:12.836 2025-12-24 08:25:15.478562 CRANWIN3 44776 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 2.91999999999999 s. 2025-12-24 08:25:15.481582 CRANWIN3 44776 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=17620 on localhost:11262 at 08:25:15.771 2025-12-24 08:25:18.956897 CRANWIN3 44776 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 3.49000000000001 s. 2025-12-24 08:25:18.959045 CRANWIN3 44776 GPCERF estimate_cerf_nngp INFO: Done with estimating cerf using nngp approach Wall clock time: 9.39 s. 2025-12-24 08:25:18.963453 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:25:18.966202 CRANWIN3 44776 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 08:25:18.97874 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:25:18.981094 CRANWIN3 44776 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 08:25:19.012048 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:25:19.015071 CRANWIN3 44776 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 08:25:19.027186 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:25:23.173699 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:25:23.176459 CRANWIN3 44776 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 08:25:23.187347 CRANWIN3 44776 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R Under development (unstable) (2025-12-23 r89222 ucrt), detected cores: 96 2025-12-24 08:25:23.189904 CRANWIN3 44776 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 08:25:23.219818 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-estimate_gps-15.R 2025-12-24 08:25:28.593264 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:25:33.897099 CRANWIN3 44776 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=28788 on localhost:11262 at 08:25:34.153 2025-12-24 08:25:36.741491 CRANWIN3 44776 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 2.84 s. 2025-12-24 08:25:36.744003 CRANWIN3 44776 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=57056 on localhost:11262 at 08:25:37.016 2025-12-24 08:25:39.782975 CRANWIN3 44776 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 3.03 s. Saving _problems/test-estimate_mean_sd_nn-37.R 2025-12-24 08:25:39.841782 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:25:44.251334 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:25:49.646608 CRANWIN3 44776 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=48944 on localhost:11262 at 08:25:49.904 2025-12-24 08:25:52.504922 CRANWIN3 44776 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 2.84 s. 2025-12-24 08:25:52.539693 CRANWIN3 44776 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 08:25:57.664612 CRANWIN3 44776 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=21756 on localhost:11262 at 08:25:57.917 2025-12-24 08:26:01.239586 CRANWIN3 44776 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 3.56 s.} ... [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-compute_deriv_nn.R:21:3'): compute_deriv_nn works as expected! ── Expected `deriv_val[1, 1]` to equal 1.558466. Differences: `actual`: -1.0 `expected`: 1.6 ── Failure ('test-compute_deriv_weights_gp.R:17:3'): compute_deriv_weights_gp works as expected! ── Expected `weights[37]` to equal 3.307249e-05. Differences: `actual`: -0.00011 `expected`: 0.00003 ── Failure ('test-compute_m_sigma.R:32:4'): compute_m_sigma works as expected! ── Expected `gp_cerf[10]` to equal 2.105425. Differences: `actual`: -6.1 `expected`: 2.1 ── Failure ('test-compute_weight_gp.R:49:3'): multiplication works ───────────── Expected `weight$weight[28]` to equal 0.0002182767. Differences: `actual`: 0.00000 `expected`: 0.00022 ── Failure ('test-estimate_gps.R:15:3'): estimate_gps works as expected. ─────── Expected `gps_m$gps[4, 1]` to equal 8.74310154. Differences: `actual`: 7.3 `expected`: 8.7 ── Failure ('test-estimate_mean_sd_nn.R:37:3'): estimate_mean_sd_nn works as expected! ── Expected `val[10]` to equal 5.031225. Differences: `actual`: 5.067 `expected`: 5.031 [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64

Version: 0.2.4
Check: tests
Result: ERROR Running ‘testthat.R’ [85s/154s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(GPCERF) > > test_check("GPCERF") 2025-12-24 05:56:02.233677 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... Loading required package: nnls Saving _problems/test-compute_deriv_nn-21.R 2025-12-24 05:56:09.007578 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_deriv_weights_gp-17.R 2025-12-24 05:56:14.153259 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_m_sigma-32.R 2025-12-24 05:56:22.844967 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:56:27.920341 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:56:32.622691 gimli2 1420650 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=1431728 on localhost:11719 at 05:56:32.991 2025-12-24 05:56:36.649458 gimli2 1420650 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 4.027 s. 2025-12-24 05:56:36.737625 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:56:41.547067 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:56:46.629246 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_weight_gp-49.R 2025-12-24 05:56:51.321513 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:56:56.117462 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:56:59.477813 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:57:02.702593 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:02.738006 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:57:07.60434 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:07.632369 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:07.668262 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:07.710548 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:07.746562 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:07.768637 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:07.805045 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:07.833274 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:57:12.652657 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 starting worker pid=1442145 on localhost:11719 at 05:57:13.073 starting worker pid=1442146 on localhost:11719 at 05:57:13.094 2025-12-24 05:57:20.96564 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:57:26.27615 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:26.283433 gimli2 1420650 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 05:57:26.287799 gimli2 1420650 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=1445237 on localhost:11719 at 05:57:26.636 2025-12-24 05:57:31.265884 gimli2 1420650 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 4.976 s.} ... 2025-12-24 05:57:31.268247 gimli2 1420650 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=1447064 on localhost:11719 at 05:57:31.653 2025-12-24 05:57:35.08694 gimli2 1420650 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 3.818 s. 2025-12-24 05:57:35.089378 gimli2 1420650 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=1448188 on localhost:11719 at 05:57:35.553 2025-12-24 05:57:40.709281 gimli2 1420650 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 5.61999999999999 s. 2025-12-24 05:57:40.717003 gimli2 1420650 GPCERF estimate_cerf_nngp INFO: Done with estimating cerf using nngp approach Wall clock time: 14.428 s. 2025-12-24 05:57:40.726354 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:40.737785 gimli2 1420650 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 05:57:40.777482 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:40.791359 gimli2 1420650 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 05:57:40.862303 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:40.873276 gimli2 1420650 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 05:57:40.902886 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:57:44.789201 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:44.801359 gimli2 1420650 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 05:57:44.827223 gimli2 1420650 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 Patched (2025-12-21 r89220), detected cores: 32 2025-12-24 05:57:44.839198 gimli2 1420650 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 05:57:44.902013 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-estimate_gps-15.R 2025-12-24 05:57:50.86983 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:57:55.766333 gimli2 1420650 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=1452950 on localhost:11719 at 05:57:56.305 2025-12-24 05:58:00.225276 gimli2 1420650 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 4.459 s. 2025-12-24 05:58:00.227682 gimli2 1420650 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=1454140 on localhost:11719 at 05:58:00.569 2025-12-24 05:58:05.400198 gimli2 1420650 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 5.173 s. Saving _problems/test-estimate_mean_sd_nn-37.R 2025-12-24 05:58:05.539531 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:58:09.266581 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:58:13.639235 gimli2 1420650 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=1457585 on localhost:11719 at 05:58:14.165 2025-12-24 05:58:17.747804 gimli2 1420650 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 4.108 s. 2025-12-24 05:58:17.796478 gimli2 1420650 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 05:58:23.435733 gimli2 1420650 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=1461182 on localhost:11719 at 05:58:23.837 2025-12-24 05:58:29.551028 gimli2 1420650 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 6.11199999999999 s.} ... [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-compute_deriv_nn.R:21:3'): compute_deriv_nn works as expected! ── Expected `deriv_val[1, 1]` to equal 1.558466. Differences: `actual`: -1.0 `expected`: 1.6 ── Failure ('test-compute_deriv_weights_gp.R:17:3'): compute_deriv_weights_gp works as expected! ── Expected `weights[37]` to equal 3.307249e-05. Differences: `actual`: -0.00011 `expected`: 0.00003 ── Failure ('test-compute_m_sigma.R:32:4'): compute_m_sigma works as expected! ── Expected `gp_cerf[10]` to equal 2.105425. Differences: `actual`: -6.1 `expected`: 2.1 ── Failure ('test-compute_weight_gp.R:49:3'): multiplication works ───────────── Expected `weight$weight[28]` to equal 0.0002182767. Differences: `actual`: 0.00000 `expected`: 0.00022 ── Failure ('test-estimate_gps.R:15:3'): estimate_gps works as expected. ─────── Expected `gps_m$gps[4, 1]` to equal 8.74310154. Differences: `actual`: 7.3 `expected`: 8.7 ── Failure ('test-estimate_mean_sd_nn.R:37:3'): estimate_mean_sd_nn works as expected! ── Expected `val[10]` to equal 5.031225. Differences: `actual`: 5.067 `expected`: 5.031 [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] Error: ! Test failures. Execution halted Flavor: r-patched-linux-x86_64

Version: 0.2.4
Check: tests
Result: ERROR Running ‘testthat.R’ [85s/165s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(GPCERF) > > test_check("GPCERF") 2025-12-27 05:42:19.104377 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... Loading required package: nnls Saving _problems/test-compute_deriv_nn-21.R 2025-12-27 05:42:25.979498 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_deriv_weights_gp-17.R 2025-12-27 05:42:31.96309 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_m_sigma-32.R 2025-12-27 05:42:40.992554 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:42:46.24367 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:42:52.037609 gimli2 832655 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=844849 on localhost:11984 at 05:42:52.401 2025-12-27 05:42:57.404636 gimli2 832655 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 5.367 s. 2025-12-27 05:42:57.478066 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:43:03.019006 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:43:09.436839 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_weight_gp-49.R 2025-12-27 05:43:15.234072 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:43:19.998547 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:43:24.004356 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:43:27.770642 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:43:27.803351 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:43:32.782964 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:43:32.822962 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:43:32.858173 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:43:32.894551 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:43:32.926379 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:43:32.956248 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:43:32.997803 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:43:33.035219 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:43:38.537569 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 starting worker pid=857200 on localhost:11984 at 05:43:38.888 starting worker pid=857201 on localhost:11984 at 05:43:38.983 2025-12-27 05:43:47.262992 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:43:52.127838 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:43:52.143196 gimli2 832655 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-27 05:43:52.152311 gimli2 832655 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=861193 on localhost:11984 at 05:43:52.544 2025-12-27 05:43:57.366121 gimli2 832655 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 5.208 s.} ... 2025-12-27 05:43:57.368708 gimli2 832655 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=862605 on localhost:11984 at 05:43:57.766 2025-12-27 05:44:02.452229 gimli2 832655 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 5.083 s. 2025-12-27 05:44:02.460178 gimli2 832655 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=863635 on localhost:11984 at 05:44:02.818 2025-12-27 05:44:08.661345 gimli2 832655 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 6.20100000000001 s. 2025-12-27 05:44:08.663622 gimli2 832655 GPCERF estimate_cerf_nngp INFO: Done with estimating cerf using nngp approach Wall clock time: 16.52 s. 2025-12-27 05:44:08.672938 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:44:08.681226 gimli2 832655 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-27 05:44:08.705635 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:44:08.719112 gimli2 832655 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-27 05:44:08.797773 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:44:08.811455 gimli2 832655 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-27 05:44:08.849041 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:44:12.414136 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:44:12.427572 gimli2 832655 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-27 05:44:12.460131 gimli2 832655 GPCERF log_system_info INFO: System name: Linux, OS type: unix, machine architecture: x86_64, user: hornik, R version 4.5.2 (2025-10-31), detected cores: 32 2025-12-27 05:44:12.473627 gimli2 832655 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-27 05:44:12.545711 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-estimate_gps-15.R 2025-12-27 05:44:17.674585 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:44:22.394511 gimli2 832655 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=868365 on localhost:11984 at 05:44:22.770 2025-12-27 05:44:26.95224 gimli2 832655 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 4.55800000000002 s. 2025-12-27 05:44:26.954828 gimli2 832655 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=869330 on localhost:11984 at 05:44:27.490 2025-12-27 05:44:31.782852 gimli2 832655 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 4.828 s. Saving _problems/test-estimate_mean_sd_nn-37.R 2025-12-27 05:44:31.846953 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:44:36.530302 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:44:42.545933 gimli2 832655 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=873507 on localhost:11984 at 05:44:42.939 2025-12-27 05:44:46.553329 gimli2 832655 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 4.00700000000001 s. 2025-12-27 05:44:46.583067 gimli2 832655 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-27 05:44:52.246751 gimli2 832655 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=876621 on localhost:11984 at 05:44:52.683 2025-12-27 05:44:58.126549 gimli2 832655 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 5.87699999999998 s.} ... [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-compute_deriv_nn.R:21:3'): compute_deriv_nn works as expected! ── Expected `deriv_val[1, 1]` to equal 1.558466. Differences: `actual`: -1.0 `expected`: 1.6 ── Failure ('test-compute_deriv_weights_gp.R:17:3'): compute_deriv_weights_gp works as expected! ── Expected `weights[37]` to equal 3.307249e-05. Differences: `actual`: -0.00011 `expected`: 0.00003 ── Failure ('test-compute_m_sigma.R:32:4'): compute_m_sigma works as expected! ── Expected `gp_cerf[10]` to equal 2.105425. Differences: `actual`: -6.1 `expected`: 2.1 ── Failure ('test-compute_weight_gp.R:49:3'): multiplication works ───────────── Expected `weight$weight[28]` to equal 0.0002182767. Differences: `actual`: 0.00000 `expected`: 0.00022 ── Failure ('test-estimate_gps.R:15:3'): estimate_gps works as expected. ─────── Expected `gps_m$gps[4, 1]` to equal 8.74310154. Differences: `actual`: 7.3 `expected`: 8.7 ── Failure ('test-estimate_mean_sd_nn.R:37:3'): estimate_mean_sd_nn works as expected! ── Expected `val[10]` to equal 5.031225. Differences: `actual`: 5.067 `expected`: 5.031 [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] Error: ! Test failures. Execution halted Flavor: r-release-linux-x86_64

Version: 0.2.4
Check: tests
Result: ERROR Running 'testthat.R' [138s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(GPCERF) > > test_check("GPCERF") 2025-12-25 08:33:01.199294 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... Loading required package: nnls Saving _problems/test-compute_deriv_nn-21.R 2025-12-25 08:33:07.024539 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_deriv_weights_gp-17.R 2025-12-25 08:33:11.937008 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_m_sigma-32.R 2025-12-25 08:33:20.064465 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:33:25.342083 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:33:31.009512 CRANWIN3 60212 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=44352 on localhost:11114 at 08:33:31.289 2025-12-25 08:33:33.847124 CRANWIN3 60212 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 2.84 s. 2025-12-25 08:33:33.892778 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:33:39.233466 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:33:44.455128 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_weight_gp-49.R 2025-12-25 08:33:49.202268 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:33:54.554352 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:33:58.291519 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:34:02.531434 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:02.546589 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:34:07.476551 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:07.489989 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:07.503764 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:07.517425 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:07.530628 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:07.544543 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:07.557938 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:07.572853 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:34:12.581795 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 starting worker pid=5404 on localhost:11114 at 08:34:12.822 starting worker pid=57236 on localhost:11114 at 08:34:12.822 2025-12-25 08:34:19.355519 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:34:24.377593 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:24.37955 CRANWIN3 60212 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-25 08:34:24.382322 CRANWIN3 60212 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=9780 on localhost:11114 at 08:34:24.588 2025-12-25 08:34:27.155695 CRANWIN3 60212 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 2.77 s.} ... 2025-12-25 08:34:27.158647 CRANWIN3 60212 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=55060 on localhost:11114 at 08:34:27.424 2025-12-25 08:34:30.117091 CRANWIN3 60212 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 2.97 s. 2025-12-25 08:34:30.11991 CRANWIN3 60212 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=59088 on localhost:11114 at 08:34:30.369 2025-12-25 08:34:33.554232 CRANWIN3 60212 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 3.43000000000001 s. 2025-12-25 08:34:33.556535 CRANWIN3 60212 GPCERF estimate_cerf_nngp INFO: Done with estimating cerf using nngp approach Wall clock time: 9.17 s. 2025-12-25 08:34:33.560453 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:33.562647 CRANWIN3 60212 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-25 08:34:33.573921 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:33.576141 CRANWIN3 60212 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-25 08:34:33.605175 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:33.607311 CRANWIN3 60212 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-25 08:34:33.617287 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:34:38.044012 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:38.047219 CRANWIN3 60212 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-25 08:34:38.061077 CRANWIN3 60212 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.5.2 (2025-10-31 ucrt), detected cores: 96 2025-12-25 08:34:38.064136 CRANWIN3 60212 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-25 08:34:38.099569 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-estimate_gps-15.R 2025-12-25 08:34:43.338492 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:34:48.860389 CRANWIN3 60212 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=50872 on localhost:11114 at 08:34:49.116 2025-12-25 08:34:51.657825 CRANWIN3 60212 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 2.8 s. 2025-12-25 08:34:51.660725 CRANWIN3 60212 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=94728 on localhost:11114 at 08:34:51.933 2025-12-25 08:34:54.640841 CRANWIN3 60212 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 2.98 s. Saving _problems/test-estimate_mean_sd_nn-37.R 2025-12-25 08:34:54.70722 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:34:58.978188 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:35:04.271481 CRANWIN3 60212 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=36152 on localhost:11114 at 08:35:04.499 2025-12-25 08:35:06.926677 CRANWIN3 60212 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 2.64999999999999 s. 2025-12-25 08:35:06.960321 CRANWIN3 60212 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-25 08:35:12.28961 CRANWIN3 60212 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=92136 on localhost:11114 at 08:35:12.558 2025-12-25 08:35:15.800009 CRANWIN3 60212 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 3.5 s.} ... [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-compute_deriv_nn.R:21:3'): compute_deriv_nn works as expected! ── Expected `deriv_val[1, 1]` to equal 1.558466. Differences: `actual`: -1.0 `expected`: 1.6 ── Failure ('test-compute_deriv_weights_gp.R:17:3'): compute_deriv_weights_gp works as expected! ── Expected `weights[37]` to equal 3.307249e-05. Differences: `actual`: -0.00011 `expected`: 0.00003 ── Failure ('test-compute_m_sigma.R:32:4'): compute_m_sigma works as expected! ── Expected `gp_cerf[10]` to equal 2.105425. Differences: `actual`: -6.1 `expected`: 2.1 ── Failure ('test-compute_weight_gp.R:49:3'): multiplication works ───────────── Expected `weight$weight[28]` to equal 0.0002182767. Differences: `actual`: 0.00000 `expected`: 0.00022 ── Failure ('test-estimate_gps.R:15:3'): estimate_gps works as expected. ─────── Expected `gps_m$gps[4, 1]` to equal 8.74310154. Differences: `actual`: 7.3 `expected`: 8.7 ── Failure ('test-estimate_mean_sd_nn.R:37:3'): estimate_mean_sd_nn works as expected! ── Expected `val[10]` to equal 5.031225. Differences: `actual`: 5.067 `expected`: 5.031 [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] Error: ! Test failures. Execution halted Flavor: r-release-windows-x86_64

Version: 0.2.4
Check: tests
Result: ERROR Running 'testthat.R' [209s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(GPCERF) > > test_check("GPCERF") 2025-12-24 12:06:17.070682 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... Loading required package: nnls Saving _problems/test-compute_deriv_nn-21.R 2025-12-24 12:06:25.362538 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_deriv_weights_gp-17.R 2025-12-24 12:06:34.214186 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_m_sigma-32.R 2025-12-24 12:06:46.55157 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:06:54.717796 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:07:03.106524 CRANWIN2 18568 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=77584 on localhost:11821 at 12:07:03.429 2025-12-24 12:07:06.868679 CRANWIN2 18568 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 3.76 s. 2025-12-24 12:07:06.923477 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:07:14.941586 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:07:23.619206 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-compute_weight_gp-49.R 2025-12-24 12:07:31.908482 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:07:39.457051 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:07:44.745028 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:07:51.583295 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:07:51.607923 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:07:59.630206 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:07:59.647258 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:07:59.665016 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:07:59.682822 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:07:59.700961 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:07:59.719322 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:07:59.737843 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:07:59.759488 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:08:07.845885 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 starting worker pid=74904 on localhost:11821 at 12:08:08.184 starting worker pid=37976 on localhost:11821 at 12:08:08.205 2025-12-24 12:08:17.116369 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:08:25.390601 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:08:25.39417 CRANWIN2 18568 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 12:08:25.471506 CRANWIN2 18568 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=94484 on localhost:11821 at 12:08:25.852 2025-12-24 12:08:29.743076 CRANWIN2 18568 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 4.27000000000001 s.} ... 2025-12-24 12:08:29.746608 CRANWIN2 18568 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=46964 on localhost:11821 at 12:08:30.019 2025-12-24 12:08:33.247613 CRANWIN2 18568 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 3.5 s. 2025-12-24 12:08:33.251011 CRANWIN2 18568 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=29156 on localhost:11821 at 12:08:33.609 2025-12-24 12:08:38.290541 CRANWIN2 18568 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 5.05000000000001 s. 2025-12-24 12:08:38.292491 CRANWIN2 18568 GPCERF estimate_cerf_nngp INFO: Done with estimating cerf using nngp approach Wall clock time: 12.91 s. 2025-12-24 12:08:38.295923 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:08:38.298036 CRANWIN2 18568 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 12:08:38.308549 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:08:38.310745 CRANWIN2 18568 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 12:08:38.352045 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:08:38.355327 CRANWIN2 18568 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 12:08:38.372038 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:08:45.158441 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:08:45.16208 CRANWIN2 18568 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 12:08:45.180947 CRANWIN2 18568 GPCERF log_system_info INFO: System name: Windows, OS type: windows, machine architecture: x86-64, user: CRAN, R version 4.4.3 (2025-02-28 ucrt), detected cores: 56 2025-12-24 12:08:45.184941 CRANWIN2 18568 GPCERF estimate_cerf_nngp INFO: Working on estimating cerf using nngp approach ... 2025-12-24 12:08:45.226221 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... Saving _problems/test-estimate_gps-15.R 2025-12-24 12:08:53.359796 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:09:01.497112 CRANWIN2 18568 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=41520 on localhost:11821 at 12:09:01.784 2025-12-24 12:09:05.249726 CRANWIN2 18568 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 3.75 s. 2025-12-24 12:09:05.253028 CRANWIN2 18568 GPCERF estimate_mean_sd_nn INFO: Working on estimating mean and sd using nngp approach ... starting worker pid=96540 on localhost:11821 at 12:09:05.529 2025-12-24 12:09:09.192135 CRANWIN2 18568 GPCERF estimate_mean_sd_nn INFO: Done with estimating mean and sd using nngp approach Wall clock time: 3.94999999999999 s. Saving _problems/test-estimate_mean_sd_nn-37.R 2025-12-24 12:09:09.260614 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:09:16.007441 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:09:24.201847 CRANWIN2 18568 GPCERF estimate_noise_nn INFO: Working on estimating residual error with nngp ... starting worker pid=95384 on localhost:11821 at 12:09:24.524 2025-12-24 12:09:28.180538 CRANWIN2 18568 GPCERF estimate_noise_nn INFO: Done with estimating residual error with nngpWall clock time: 3.99000000000001 s. 2025-12-24 12:09:28.211805 CRANWIN2 18568 GPCERF estimate_gps INFO: Started estimating GPS values ... 2025-12-24 12:09:36.632002 CRANWIN2 18568 GPCERF find_optimal_nn INFO: Started finding optimal values ... starting worker pid=60404 on localhost:11821 at 12:09:36.915 2025-12-24 12:09:41.357486 CRANWIN2 18568 GPCERF find_optimal_nn INFO: Done with finding optimal value.(Wall clock time: 4.72 s.} ... [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-compute_deriv_nn.R:21:3'): compute_deriv_nn works as expected! ── Expected `deriv_val[1, 1]` to equal 1.558466. Differences: `actual`: -1.0 `expected`: 1.6 ── Failure ('test-compute_deriv_weights_gp.R:17:3'): compute_deriv_weights_gp works as expected! ── Expected `weights[37]` to equal 3.307249e-05. Differences: `actual`: -0.00011 `expected`: 0.00003 ── Failure ('test-compute_m_sigma.R:32:4'): compute_m_sigma works as expected! ── Expected `gp_cerf[10]` to equal 2.105425. Differences: `actual`: -6.1 `expected`: 2.1 ── Failure ('test-compute_weight_gp.R:49:3'): multiplication works ───────────── Expected `weight$weight[28]` to equal 0.0002182767. Differences: `actual`: 0.00000 `expected`: 0.00022 ── Failure ('test-estimate_gps.R:15:3'): estimate_gps works as expected. ─────── Expected `gps_m$gps[4, 1]` to equal 8.74310154. Differences: `actual`: 7.3 `expected`: 8.7 ── Failure ('test-estimate_mean_sd_nn.R:37:3'): estimate_mean_sd_nn works as expected! ── Expected `val[10]` to equal 5.031225. Differences: `actual`: 5.067 `expected`: 5.031 [ FAIL 6 | WARN 2 | SKIP 0 | PASS 101 ] Error: ! Test failures. Execution halted Flavor: r-oldrel-windows-x86_64