CRAN Package Check Results for Maintainer ‘Andrea Carenzo <andrea.carenzo at gmail.com>’

Last updated on 2025-04-12 20:52:09 CEST.

Package	ERROR	OK
hacksig	9	5

Package hacksig

Current CRAN status: ERROR: 9, OK: 5

Version: 0.1.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘hacksig.Rmd’ using rmarkdown Quitting from hacksig.Rmd:215-225 [unnamed-chunk-19] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `msigdbr()`: ! Unknown subcollection. --- Backtrace: ▆ 1. ├─... %>% deframe() 2. ├─tibble::deframe(.) 3. ├─dplyr::mutate(., genes = map(genes, compose(as_vector, unname))) 4. ├─tidyr::nest(., genes = c(gene_symbol)) 5. ├─dplyr::distinct(., gs_name, gene_symbol) 6. └─msigdbr::msigdbr(species = "Homo sapiens", subcategory = "KEGG") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'hacksig.Rmd' failed with diagnostics: Unknown subcollection. --- failed re-building ‘hacksig.Rmd’ SUMMARY: processing the following file failed: ‘hacksig.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘hacksig.Rmd’ using rmarkdown Quitting from hacksig.Rmd:215-225 [unnamed-chunk-19] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `msigdbr()`: ! Unknown subcollection. --- Backtrace: ▆ 1. ├─... %>% deframe() 2. ├─tibble::deframe(.) 3. ├─dplyr::mutate(., genes = map(genes, compose(as_vector, unname))) 4. ├─tidyr::nest(., genes = c(gene_symbol)) 5. ├─dplyr::distinct(., gs_name, gene_symbol) 6. └─msigdbr::msigdbr(species = "Homo sapiens", subcategory = "KEGG") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'hacksig.Rmd' failed with diagnostics: Unknown subcollection. --- failed re-building ‘hacksig.Rmd’ SUMMARY: processing the following file failed: ‘hacksig.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64