CRAN Package Check Results for Maintainer ‘Adam Struzik <adastr5 at st.amu.edu.pl>’

Last updated on 2025-12-04 09:50:17 CET.

Package	ERROR	OK
automatedRecLin	2	11

Package automatedRecLin

Current CRAN status: ERROR: 2, OK: 11

Version: 1.0.0
Check: examples
Result: ERROR Running examples in ‘automatedRecLin-Ex.R’ failed The error most likely occurred in: > ### Name: custom_rec_lin_model > ### Title: Create a Custom Record Linkage Model > ### Aliases: custom_rec_lin_model > > ### ** Examples > > if (requireNamespace("xgboost", quietly = TRUE)) { + df_1 <- data.frame( + "name" = c("James", "Emma", "William", "Olivia", "Thomas", + "Sophie", "Harry", "Amelia", "George", "Isabella"), + "surname" = c("Smith", "Johnson", "Brown", "Taylor", "Wilson", + "Davis", "Clark", "Harris", "Lewis", "Walker") + ) + df_2 <- data.frame( + "name" = c("James", "Ema", "Wimliam", "Olivia", "Charlotte", + "Henry", "Lucy", "Edward", "Alice", "Jack"), + "surname" = c("Smith", "Johnson", "Bron", "Tailor", "Moore", + "Evans", "Hall", "Wright", "Green", "King") + ) + comparators <- list("name" = jarowinkler_complement(), + "surname" = jarowinkler_complement()) + matches <- data.frame("a" = 1:4, "b" = 1:4) + vectors <- comparison_vectors(A = df_1, B = df_2, variables = c("name", "surname"), + comparators = comparators, matches = matches) + train_data <- xgboost::xgb.DMatrix( + data = as.matrix(vectors$Omega[, c("gamma_name", "gamma_surname")]), + label = vectors$Omega$match + ) + params <- list(objective = "binary:logistic", + eval_metric = "logloss") + model_xgb <- xgboost::xgboost(data = train_data, params = params, + nrounds = 100, verbose = 0) + custom_xgb_model <- custom_rec_lin_model(model_xgb, vectors) + custom_xgb_model + } Warning in throw_err_or_depr_msg("Parameter(s) have been removed from this function: ", : Parameter(s) have been removed from this function: params. This warning will become an error in a future version. Warning in throw_err_or_depr_msg("Passed unrecognized parameters: ", paste(head(names_unrecognized), : Passed unrecognized parameters: verbose. This warning will become an error in a future version. Warning in throw_err_or_depr_msg("Parameter '", match_old, "' has been renamed to '", : Parameter 'data' has been renamed to 'x'. This warning will become an error in a future version. Error in xgboost::xgboost(data = train_data, params = params, nrounds = 100, : argument "y" is missing, with no default Calls: <Anonymous> -> process.y.margin.and.objective -> NROW Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0.0
Check: tests
Result: ERROR Running ‘tinytest.R’ [1s/26s] Running the tests in ‘tests/tinytest.R’ failed. Complete output: > if ( requireNamespace("tinytest", quietly=TRUE) ){ + tinytest::test_package("automatedRecLin", ncpu = 1) + } starting worker pid=2934496 on localhost:11531 at 11:07:19.697 test_comparators.R............ 2 tests <1b>[0;32mOK<1b>[0m <1b>[0;34m0.3s<1b>[0m test_comparison_vectors.R..... 2 tests <1b>[0;32mOK<1b>[0m <1b>[0;34m0.8s<1b>[0m kliep function error: missing value where TRUE/FALSE needed ======================================================== kliep function error: missing value where TRUE/FALSE needed ======================================================== test_mec.R.................... 11 tests <1b>[0;32mOK<1b>[0m <1b>[0;34m4.3s<1b>[0m OMP: Warning #96: Cannot form a team with 8 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). Error in checkForRemoteErrors(val) : one node produced an error: argument "y" is missing, with no default Calls: <Anonymous> ... clusterApply -> staticClusterApply -> checkForRemoteErrors Warning messages: 1: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) : There are duplicate values in 'sigma', only the unique values are used. 2: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) : There are duplicate values in 'sigma', only the unique values are used. 3: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) : There are duplicate values in 'sigma', only the unique values are used. 4: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) : There are duplicate values in 'sigma', only the unique values are used. 5: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) : There are duplicate values in 'sigma', only the unique values are used. 6: In throw_err_or_depr_msg("Parameter(s) have been removed from this function: ", : Parameter(s) have been removed from this function: params. This warning will become an error in a future version. 7: In throw_err_or_depr_msg("Passed unrecognized parameters: ", paste(head(names_unrecognized), : Passed unrecognized parameters: verbose. This warning will become an error in a future version. 8: In throw_err_or_depr_msg("Parameter '", match_old, "' has been renamed to '", : Parameter 'data' has been renamed to 'x'. This warning will become an error in a future version. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.0.0
Check: tests
Result: ERROR Running ‘tinytest.R’ [1s/41s] Running the tests in ‘tests/tinytest.R’ failed. Complete output: > if ( requireNamespace("tinytest", quietly=TRUE) ){ + tinytest::test_package("automatedRecLin", ncpu = 1) + } starting worker pid=3286618 on localhost:11463 at 12:02:26.657 test_comparators.R............ 2 tests <1b>[0;32mOK<1b>[0m <1b>[0;34m0.6s<1b>[0m test_comparison_vectors.R..... 2 tests <1b>[0;32mOK<1b>[0m <1b>[0;34m0.3s<1b>[0m kliep function error: missing value where TRUE/FALSE needed ======================================================== kliep function error: missing value where TRUE/FALSE needed ======================================================== test_mec.R.................... 11 tests <1b>[0;32mOK<1b>[0m <1b>[0;34m8.8s<1b>[0m Error in checkForRemoteErrors(val) : one node produced an error: argument "y" is missing, with no default Calls: <Anonymous> ... clusterApply -> staticClusterApply -> checkForRemoteErrors Warning messages: 1: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) : There are duplicate values in 'sigma', only the unique values are used. 2: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) : There are duplicate values in 'sigma', only the unique values are used. 3: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) : There are duplicate values in 'sigma', only the unique values are used. 4: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) : There are duplicate values in 'sigma', only the unique values are used. 5: In check.sigma(nsigma, sigma_quantile, sigma, dist_nu) : There are duplicate values in 'sigma', only the unique values are used. 6: In throw_err_or_depr_msg("Parameter(s) have been removed from this function: ", : Parameter(s) have been removed from this function: params. This warning will become an error in a future version. 7: In throw_err_or_depr_msg("Passed unrecognized parameters: ", paste(head(names_unrecognized), : Passed unrecognized parameters: verbose. This warning will become an error in a future version. 8: In throw_err_or_depr_msg("Parameter '", match_old, "' has been renamed to '", : Parameter 'data' has been renamed to 'x'. This warning will become an error in a future version. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc