0ce2d9aea85065ae098e799d8a04bd67 *DESCRIPTION
a661c16e791afa15a89529c91e10e643 *LICENSE.note
191a4d829f08f29a4ef5dcfcfcaccf34 *NAMESPACE
cfd8a7f0f5b7f28abaad47a0fb36303e *NEWS.md
7864818c13aba4f1f56fc2acdbe16375 *R/RcppExports.R
786c95171cd823e067b50b44e5f9691d *R/rchime-package.R
19ca74f57899969fbe51bf78c9c7264e *R/rchime.R
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19f23fd1f28a7831e8fb39a4bf414c32 *R/rchime_options.R
dce6836f25dbca0d0a922a6c26ca9bcc *R/silva_gold.R
17561a2ccc9592c89d85f0e6ec96199e *R/utils_internal.R
d923448e52bd6f05220685a3a5b64b08 *README.md
21c9401b8c07f38d762ade4612fc4ffe *build/partial.rdb
bb2f5028ab9ddea3af78fdd26a89ba58 *build/vignette.rds
6071edd604dbeb75308cfbedc7790398 *cleanup
7fae56bbaa0cceb3c36dab62addd57dd *configure
2ffc3b0bccc87fa4b4730863bc0a9061 *inst/CITATION
4dd92231c2bb2ae456013684fa9c5afd *inst/doc/chimera_report.R
27a2c569841e1715a2c3c71c3eba884e *inst/doc/chimera_report.Rmd
9c86d9b8aa77901b1c63bdde5914f1c5 *inst/doc/chimera_report.html
4ee00b0388204574eb77523ff00dad28 *inst/doc/denovo_based_detection.R
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5b6abf8e825694fc60b2458d6f666988 *inst/extdata/miseq_data_frame_by_sample_small.rds
dfce35fa0e2a2318134b4e205566276d *inst/extdata/miseq_fasta.rds
e76ec435ea67e53d23282e4cd09f0e58 *inst/extdata/miseq_names_by_sample.rds
e45ff3c1ec0f38158b8b38e11406ca85 *inst/extdata/miseq_sequences_by_sample.rds
6b9413a05506b0a2cacfd1ddaaa96e77 *inst/extdata/silva.gold.rds
58a391d84d4dc02270d77402f7a87dd0 *inst/extdata/single_sample_abundance.rds
31f100bbbc4143816f9ade360c11422c *inst/extdata/strollur_miseq_tiny.rds
48c0cfb0b73618d42609d7263fa02af9 *inst/extdata/strollur_multi_sample_small.rds
d2b91b22d9d5168f4a0511db9884ed5c *inst/extdata/strollur_reference.rds
46eff8e1e492199a3e563c8e625d4ac1 *inst/extdata/strollur_single_sample_tiny.rds
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35dae3b408992f61aabe6c5012956bcf *man/figures/logo.png
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fade437adefcd722d7ba2eddc3b8bf95 *man/silva_gold.Rd
27b427f16e7e592d4d5520c13662b9b6 *src/Makevars.in
ca276d428807f892b0950208d4850565 *src/Makevars.win
adfbfe05a08d937a3fcfb48b85727d8f *src/RcppExports.cpp
1b05ce14644ad9e9be29ce2e66dffe78 *src/align_simd.cc
1de598e9765ea9a173d8f3be3a7044f7 *src/align_simd.h
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65aa89e252ea24c9eb7f07ea660e88a0 *src/bitmap.h
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79f3804688d76511e2f0ba5c20001857 *src/rcpp_rchime.cpp
951d6f20d25ab604ae2f99eeaeb5605d *src/searchcore.cc
a29954e1c713c795407c6001d5603e43 *src/searchcore.h
83c21b4cfbd975a4e380ab3979cb3a3a *src/seqcmp.cpp
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1171b667e17c95e9592294e220820a9a *src/span.h
96aee3508113c96fb74e5d38447f965a *src/unique.cc
24d27ec87cff71043ca6ebb6ee4f7eaa *src/unique.h
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46b14f545d21298fd38543bda769b825 *src/util.h
19decec15b534d5f9b05da2a76b3529c *src/vsearch.h
618cc0cba6b87b1031d7b3b7df63e267 *src/vsearch_main.cc
03f5fd9551c403f05be54ca301c38f9a *src/vsearch_main.h
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698b8d48df1e321ebe9c5c30e72fbe85 *tests/testthat/helper.R
744eec5a961b6e58d1d8bb3b1d7f337e *tests/testthat/test-rchime_dataframe.R
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6b23f4a3371fd70d0861a3b0e78cb886 *tests/testthat/test-rcpp_rchime.R
27a2c569841e1715a2c3c71c3eba884e *vignettes/chimera_report.Rmd
cc61bacb2c6b58ff9917f04892ed4ca1 *vignettes/denovo_based_detection.Rmd
7403c6ff154d38340d88af56c6783652 *vignettes/rchime.Rmd
bb0601c446bd1a360227a567d67b88b1 *vignettes/reference_based_detection.Rmd
