Type: Package
Package: b3gbi
Title: General Biodiversity Indicators for Biodiversity Data Cubes
Version: 1.1.3
Authors@R: c(
    person("Shawn", "Dove", email = "Shawn.Dove@allzool.bio.uni-giessen.de",
           role = c("aut", "cre"), comment = c(ORCID = "0000-0001-9465-5638")),
    person("Ward", "Langeraert", role = "ctb", comment = c(ORCID = "0000-0002-5900-8109")),
    person("Peter", "Desmet", role = "ctb", comment = c(ORCID = "0000-0002-8442-8025")),
    person("University of Giessen", role = "cph"),
    person("European Union", role = "fnd",
           comment = "Horizon Europe Research and Innovation Programme, grant 101059592")
  )
Description: Calculate general biodiversity indicators from species
    occurrence cubes, such as those produced by the 'GBIF' (Global
    Biodiversity Information Facility) occurrence cube service
    <https://techdocs.gbif.org/en/data-use/data-cubes>. Indicators include
    observed and coverage-based rarefied species richness and Hill numbers
    (via 'iNEXT'), evenness, rarity, taxonomic distinctness, occupancy,
    turnover and sample completeness, and can be calculated over time (time
    series) or space (maps), with bootstrap confidence intervals. Cubes using
    the EEA reference grid, MGRS, the extended quarter-degree grid (EQDGC) or
    ISEA3H grids are supported. For details see Dove (2026)
    <doi:10.21105/joss.10963>.
License: MIT + file LICENSE
URL: https://github.com/b-cubed-eu/b3gbi,
        https://b-cubed-eu.github.io/b3gbi/
Depends: R (>= 3.5.0)
Imports: boot, dplyr, ggplot2, iNEXT, magrittr, purrr, readr, rlang,
        rnaturalearth, scales, sf, stringr, tibble, tidyr, tidyselect,
        units
Suggests: bit64, dggridR, dubicube, knitr, mapview, mockery, mockr,
        patchwork, RColorBrewer, rgbif (>= 3.7.0), rmarkdown,
        rnaturalearthdata, rnaturalearthhires, testthat (>= 3.0.0),
        withr
Config/testthat/edition: 3
Config/Needs/check: b-cubed-eu/dubicube, ropensci/rnaturalearthhires
Config/Needs/coverage: b-cubed-eu/dubicube, ropensci/rnaturalearthhires
Config/Needs/website: b-cubed-eu/dubicube, ropensci/rnaturalearthhires
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.3
VignetteBuilder: knitr, rmarkdown
Additional_repositories: https://b-cubed-eu.r-universe.dev,
        https://ropensci.r-universe.dev
BugReports: https://github.com/b-cubed-eu/b3gbi/issues
NeedsCompilation: no
Packaged: 2026-10-11 10:08:50 UTC; Shawn
Author: Shawn Dove [aut, cre] (ORCID: <https://orcid.org/0000-0001-9465-5638>),
  Ward Langeraert [ctb] (ORCID: <https://orcid.org/0000-0002-5900-8109>),
  Peter Desmet [ctb] (ORCID: <https://orcid.org/0000-0002-8442-8025>),
  University of Giessen [cph],
  European Union [fnd] (Horizon Europe Research and Innovation Programme,
    grant 101059592)
Maintainer: Shawn Dove <Shawn.Dove@allzool.bio.uni-giessen.de>
Repository: CRAN
Date/Publication: 2026-10-21 15:40:19 UTC
