2bd37e7b2bd3a14996db2b9251211166 *DESCRIPTION
c73ddf7b7789ce168caf0ad4597ff2e3 *NAMESPACE
ab1d8080b33273a81933134f8e9af140 *NEWS.md
3ea6c0313e14f32ef3263df2b7ab80c0 *R/Rsearch-package.R
ddf7ed34570ca0828ae85cbbf12987e9 *R/fastx_combine_files.R
77d3c1166502794e3190058071caf44a *R/fastx_synchronize.R
4ca6730d2e3176abff36dcc2a6aaec78 *R/helpers.R
6d971514b70019a27a2d34f6db1a111c *R/plot_base_quality.R
370cb9aabd87bd0d9004e37f55ec5d14 *R/plot_ee_rate_dist.R
895c5c69c0a6fa0e8539da4088c9d568 *R/plot_read_quality.R
1e04ebae2909a263146ae1e83eb13462 *R/plot_size_dist.R
67c492a3a0a1dd74d32c8aece93db5bd *R/rsearch_obj.R
a0c1a77b94ba942aac3bec7f9e58d270 *R/taxonomy_tree.R
60b28c60db71e235c664a838029b5156 *R/vs_alignment_classification.R
294fec0451a386462c265b2d4e363445 *R/vs_cluster_size.R
8931e4e148bf49a114405373808f909d *R/vs_cluster_subseq.R
d4763ef4732f89ec458caf2a190bbb96 *R/vs_cluster_unoise.R
b011444f0a6d5d10ca0fa6e557163da1 *R/vs_fastq_join.R
c63991b03117e897c49b3ea84a1868a6 *R/vs_fastq_mergepairs.R
dd47b4e1ff1b1d115e5122ebe635fbd8 *R/vs_fastx_subsample.R
d96f8b7eb27983fa968c95312e986307 *R/vs_fastx_trim_filt.R
0068c70359e6aef97b1e4bddfee82f1b *R/vs_fastx_uniques.R
0c211072e6b5daeb384a3a3a92134f14 *R/vs_merging_lengths.R
15d306402361969ce614d0716743b4c8 *R/vs_optimize_truncee_rate.R
b5fda62fe2c92bd10e34368e74cf4d0d *R/vs_optimize_truncqual.R
69406373bb179970f7179b7df1d105cd *R/vs_search_exact.R
ac5225c2f382148be2fdbb7d6d2b436a *R/vs_sintax.R
76bd78b8148013e284274c7d654145f0 *R/vs_uchime_denovo.R
a4909afc1958b19e6acccf32777e966a *R/vs_uchime_ref.R
3f7f948593c51fdd0be227af3eb043d7 *R/vs_usearch_global.R
e57a27501635f80ed9cf18354432b2d9 *R/vsearch.R
44b7be47da367f9d98ec3e2f3f490770 *R/zzz.R
3a80f35d7bc09ecc73dcdd4e8e6a5cc4 *README.md
1dd12aeee3d43a02e0fff797f9c542fe *inst/extdata/readcount_data.tsv
417c00776453937fd27917db07b5eb3f *inst/extdata/sample_data.tsv
c3d1420a4ec2d4a136edef827d0ac8fc *inst/extdata/sequence_data.tsv
7764c7636b6e898dca9a50ed35e8ce24 *inst/extdata/sintax_db.fasta
1e998da67a7994f173050d5827880646 *inst/extdata/small.fasta
877f1c211d71d3e8bf9e7a6d83d8fb57 *inst/extdata/small_R1.fq
ca921a290a1b632954ca48ba8668eed1 *inst/extdata/small_R2.fq
55a539db1670fcafd4a1f1c5afea59f1 *inst/extdata/small_derep_R1.fa
6335922c43cde0044177dcae3052bd08 *inst/extdata/small_merged.fq
5bdedcb636b6d500f8c07c295ced35e3 *inst/extdata/vsearch_executable.rds
975aa5378ec292357199c025473e9004 *man/Rsearch-package.Rd
3e0b3d458ec502f330b5a86a37750205 *man/fastx_combine_files.Rd
3f1c796a465b9b0fdfae2584d12729af *man/fastx_synchronize.Rd
3d3c3ad7ce7c0472295e33f483be1e7f *man/figures/logo.png
d0d3d54c49b072679d8391fb51a0a6d9 *man/make_sintax_db.Rd
783121feb594c5195083fcf2c01bc835 *man/phyloseq2rsearch.Rd
d8b86f5833d68ec1b188ed470842aa5b *man/plot_base_quality.Rd
c921b6c3faa9f384cc7abca57c302769 *man/plot_ee_rate_dist.Rd
ef69b6d1cd33b4fa057f77589f9f9dda *man/plot_read_quality.Rd
3e9846b7452ee42dc1380279484a11fa *man/plot_size_dist.Rd
eb476e82d19a1ba666e218940a873027 *man/rsearch2phyloseq.Rd
588cbd5724d62f3814dd525b4e202b51 *man/rsearch_obj.Rd
6ec9ab33880a9b5edc35b2214f96eb4f *man/set_vsearch_executable.Rd
844bf255b1cd0dad6835a8b30074ae90 *man/taxonomy_distance.Rd
7e089c636637a21010331dff38e9a3ee *man/taxonomy_tree.Rd
e4e8b75ce729a7f1760c8f50adf31e7b *man/vs_alignment_classification.Rd
1c3ad0b671c32bdba592b27b79ecdfc2 *man/vs_cluster_size.Rd
63acca28a03e64d737141e2229752403 *man/vs_cluster_subseq.Rd
a463a703d1898c7b7a4897d3cb575113 *man/vs_cluster_unoise.Rd
cf20e373f40fb286a7ae71a7cc796371 *man/vs_fastq_join.Rd
4529e2f903af968fff27da2b2b9dab93 *man/vs_fastq_mergepairs.Rd
6e6a80b36a7d348ccf82195ab4f72493 *man/vs_fastx_subsample.Rd
581315e7b8c787b564b926ca123bf539 *man/vs_fastx_trim_filt.Rd
e1320e697ae13a5e9cf8c9b769f2ec67 *man/vs_fastx_uniques.Rd
397353c494f1777391f38481d283cdf7 *man/vs_merging_lengths.Rd
dab69c5b14080f2d480d7555d986d746 *man/vs_optimize_truncee_rate.Rd
8d450b68e02520118d4799d7da6e2516 *man/vs_optimize_truncqual.Rd
99a1985c331d6837d357214a4570f7c4 *man/vs_search_exact.Rd
4fe5ad4a1101653b2876debc306c08ab *man/vs_sintax.Rd
e3d77e09f02e5ad7ed6a93eaa9c0ebbd *man/vs_uchime_denovo.Rd
e4aaab46427a29d099c6b20b14b65721 *man/vs_uchime_ref.Rd
3e82f1540b864fa86f6dc598ad828392 *man/vs_usearch_global.Rd
f206490e60a785dcc50405f955bffc57 *man/vsearch.Rd
