tbl.nodes <- data.frame(id=c("A", "B", "C"),
type=c("kinase", "TF", "glycoprotein"),
lfc=c(-3, 1, 1),
count=c(0, 0, 0),
stringsAsFactors=FALSE)
tbl.edges <- data.frame(source=c("A", "B", "C"),
target=c("B", "C", "A"),
interaction=c("phosphorylates", "synthetic lethal", "unknown"),
stringsAsFactors=FALSE)
graph.json <- toJSON(dataFramesToJSON(tbl.edges, tbl.nodes), auto_unbox=TRUE)
#print("renderCyjShiny")
#print(graph.json)
#print(class(graph.json))
cyjShiny(graph=graph.json, layoutName="cola")