GWAF-package {GWAF}R Documentation

Genome-Wide Association analyses with Family data

Description

Functions to fit Linear Mixed Effects (LME) model accounting for within pedigree correlation for testing genetic association between SNPs and a continuous trait and functions to fit Generalized Estimation Equation (GEE) model using each pedigree as a cluster for testing genetic association between SNPs and a dichotomous trait. In addition, GWAF package also provides functions for making genome-wide p-values plot and QQ plot containing genomic control parameter estimate.

Details

Package: GWAF
Type: Package
Version: 1.0
Date: 2009-09-06
License: GPL (>= 2)

Author(s)

Qiong Yang <qyang@bu.edu> and Ming-Huei Chen <mhchen@bu.edu>

Maintainer: Ming-Huei Chen <mhchen@bu.edu>


[Package GWAF version 1.0 Index]