# Permutation Testing Network Module Preservation Across Datasets

## Documentation for package ‘NetRep’ version 1.2.9

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

NetRep-package | Fast permutation procedure for testing network module replication
as.disk.matrix | The 'disk.matrix' class
as.disk.matrix-method | The 'disk.matrix' class
as.matrix-method | The 'disk.matrix' class
attach.disk.matrix | The 'disk.matrix' class
discovery_correlation | Example data
discovery_data | Example data
discovery_network | Example data
disk.matrix | The 'disk.matrix' class
example-data | Example data
is.disk.matrix | The 'disk.matrix' class
modulePreservation | Replication and preservation of network modules across datasets
module_labels | Example data
NetRep | Fast permutation procedure for testing network module replication
NetRep-data | Example data
networkProperties | Calculate the topological properties for a network module
plotModule | Plot the topology of a network module
requiredPerms | How many permutations do I need to test at my desired significance level?
serialize.table | The 'disk.matrix' class
show-method | The 'disk.matrix' class
test_correlation | Example data
test_data | Example data
test_network | Example data