Package: linf
Type: Package
Title: L-Infinity Normalization and Dominant Community State Types
Version: 0.1.0
Authors@R: 
    person("Pawel", "Gajer", , "pgajer@gmail.com", role = c("aut", "cre"))
Author: Pawel Gajer [aut, cre]
Maintainer: Pawel Gajer <pgajer@gmail.com>
Description: Implements L-infinity normalization for compositional matrices,
    assigns samples to dominant features, constructs truncated and
    hierarchically refined dominant community state types, and computes
    representative landmark profiles. The methods are described in the
    accompanying publication <doi:10.48550/arXiv.2503.21543>. Bundled vaginal
    and gut microbiome data support reproducible demonstrations of the package
    interface; phenotype fields in the stratified gut subset are illustrative
    and are not suitable for population-level inference.
License: MIT + file LICENSE
Encoding: UTF-8
Language: en-US
LazyData: true
Depends: R (>= 4.0)
Imports: Matrix, methods
Suggests: testthat (>= 3.2.0), htmltools, knitr, plotly, rmarkdown
VignetteBuilder: knitr
Config/testthat/edition: 3
URL: https://github.com/pgajer/linf, https://arxiv.org/abs/2503.21543
BugReports: https://github.com/pgajer/linf/issues
Config/roxygen2/version: 8.0.0
RoxygenNote: 7.3.3
NeedsCompilation: no
Packaged: 2026-07-26 21:51:49 UTC; pgajer
Repository: CRAN
Date/Publication: 2026-08-05 08:40:02 UTC
Built: R 4.5.3; ; 2026-08-05 08:56:41 UTC; windows
