Using 'ggplot2' Feature to Write Readable R Code for Circular Visualization

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Documentation for package ‘circlizePlus’ version 0.9.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

+-method	Addition rules in circlizePlus
addition-rules	Addition rules in circlizePlus
allele_frequency	Data set in circlizePlus
ccArrow	Draw an arrow
ccBarplot	Draw barplots
ccBoxplot	Draw boxplots
ccCell	Generate a cell container that belongs to a particular sector
ccCell-class	S4 class ccCell
ccCellGeom-class	S4 class ccCellGeom
ccCells	Generate a list of multiple object ccCell-class
ccCells-class	S4 class ccCells
ccDendrogram	Draw dendrogram plots in a track
ccGenomicAxis	Add genomic axes
ccGenomicCellGeom-class	S4 class ccGenomicCellGeom
ccGenomicDensity	Create a track of density plot
ccGenomicHeatmap	Define a heatmap track for genomic graph
ccGenomicIdeogram	Define an ideograms track for genomic graph
ccGenomicLabels	Add labels to specific genomic track
ccGenomicLines	Add lines for genomic data visualization
ccGenomicLink	Add links between two sets of genomic positions
ccGenomicLink-class	S4 class ccGenomicLink
ccGenomicPoints	Add points for genomic data visualization
ccGenomicRainfall	Create a rainfall plot
ccGenomicRect	Draw rectangle for genomic data visualization
ccGenomicText	Add text for genomic data visualization
ccGenomicTrack	Define a track for genomic data visualization
ccGenomicTrack-class	S4 class ccGenomicTrack
ccHeatmap	Object generator for S4 class ccHeatmap
ccHeatmap-class	S4 class ccHeatmap
ccHeatmapLink	Draw a link between two matrix rows in the circular heatmap
ccHeatmapLink-class	S4 class ccHeatmapLink
ccLines	Draw lines in a region
ccLink	Add a link
ccLink-class	S4 class ccLink
ccPar	Parameters for the circular layout
ccPar-class	Object generator for S4 class ccPar
ccPlot	Object generator for S4 class ccPlot
ccPlot-class	S4 class ccPlot
ccPoints	Draw points in a region
ccPolygon	Draw polygon
ccRaster	Add raster image
ccRect	Draw rectangle in a region
ccSegments	Draw segments connecting points in a region
ccText	Draw text in a cell
ccTrack	Define a generic track
ccTrack-class	S4 class ccTrack
ccTrackGeom-class	S4 class ccTrackGeom
ccTrackHist	Define a track of histograms
ccTrackLines	Add lines on all sections of a single track.
ccTrackPoints	Add points on all sections of a single track.
ccTrackText	Add texts on all sections of a single track.
ccViolin	Draw violin plots
ccXaxis	Draw x-axis
ccYaxis	Draw y-axis
copy_number	Data set in circlizePlus
data-set	Data set in circlizePlus
junctions	Data set in circlizePlus
r1	Data set in circlizePlus
r2	Data set in circlizePlus
show-method	Draw the figures described by ccHeatmap
show-method	Draw the figures described by ccPlot