# High-Level Plotting Built Upon 'ggplot2' and Other Plotting Packages

## Documentation for package ‘plotthis’ version 0.9.0

- DESCRIPTION file.

## Help Pages

AlluvialPlot | Sankey / Alluvial Plot
AreaPlot | Area plot
BarPlot | Bar Plot
BoxPlot | Box / Violin Plot
ChordPlot | Chord / Circos plot
CircosPlot | Chord / Circos plot
ClustreePlot | Clustree Plot
CorPairsPlot | CorPairsPlot
CorPlot | CorPlot
DensityPlot | Density Plot / Histogram
DimPlot | DimPLot / FeatureDimPlot
dim_example | An example data for dimensionality reduction plot
DotPlot | Dot Plot / Scatter Plot / Lollipop Plot
element_grob.element_textbox | Theme element that add a box to the text
element_textbox | Theme element that add a box to the text
EnrichMap | Enrichment Map/Network
EnrichNetwork | Enrichment Map/Network
enrich_example | An example of clusterProfiler enrichment result
enrich_multidb_example | An example of clusterProfiler enrichment result with multiple databases
FeatureDimPlot | DimPLot / FeatureDimPlot
GSEAPlot | GSEA plots
GSEASummaryPlot | GSEA plots
gsea_example | An example of GSEA result from fgsea package
Heatmap | Heatmap
Histogram | Density Plot / Histogram
JitterPlot | Jitter Plot
LinePlot | Line Plot
LollipopPlot | Dot Plot / Scatter Plot / Lollipop Plot
ManhattanPlot | ManhattanPlot
Network | Network
palette_list | A list of palettes for use in data visualization
palette_this | Color palettes collected in plotthis.
PieChart | Pie Chart
QQPlot | QQ plot
RadarPlot | Radar plot / Spider plot
RarefactionPlot | RarefactionPlot
RidgePlot | Ridge Plot
RingPlot | Ring Plot
ROCCurve | ROC curve
SankeyPlot | Sankey / Alluvial Plot
ScatterPlot | Scatter Plot
show_palettes | Show the color palettes
SpatImagePlot | Plots for spatial elements
SpatMasksPlot | Plots for spatial elements
SpatPointsPlot | Plots for spatial elements
SpatShapesPlot | Plots for spatial elements
SpatShapesPlot.data.frame | Plots for spatial elements
SpatShapesPlot.SpatVector | Plots for spatial elements
SpiderPlot | Radar plot / Spider plot
SplitBarPlot | Bar Plot
theme_blank | Blank theme
theme_box | Box theme
theme_this | A ggplot2 theme and palettes for plotthis Borrowed from the 'theme_this' function in the 'SCP' pipeline
TrendPlot | Trend plot
UpsetPlot | Upset Plot
VelocityPlot | Cell velocity plot
VennDiagram | Venn diagram
ViolinPlot | Box / Violin Plot
VolcanoPlot | Volcano plot
WaterfallPlot | Bar Plot
WordCloudPlot | Word Cloud Plot
words_excluded | Excluded words in keyword enrichment analysis and extraction