| ari | Adjusted Rand index |
| plot.thmm | Plot a fitted THMM |
| predict.thmm | Decode new curves with a fitted THMM |
| rbm | Simulate sample paths of (fractional) Brownian motion with drift |
| rbridge | Simulate smooth Brownian bridge noise |
| rmarkov | Simulate a Markov chain |
| rou | Simulate sample paths of the Ornstein-Uhlenbeck process |
| rthmm | Simulate data from a topological hidden Markov model |
| simulate.thmm | Simulate from a fitted THMM |
| thmm | Fit a topological hidden Markov model |