Ecosystem Gas Fluxes Calculations for Closed Loop Chamber Setup

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Documentation for package ‘fluxible’ version 0.0.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

co2_conc	CO2 concentration
co2_conc_missing	CO2 concentration
co2_df_missing	CO2 concentration with missing data
co2_df_short	CO2 concentration
co2_fluxes	CO2 fluxes
co2_liahovden	CO2 concentration at Liahovden
flux_calc	calculates ecosystem gas fluxes
flux_cut	filter cut data before calculating fluxes
flux_fitting	Fitting a model to concentration data and estimating the slope
flux_fitting_exp	Fitting a model to the gas concentration curve and estimating the slope over time, using the exponential model from Zhao et al (2018)
flux_fitting_lin	linear fit to gas concentration over time
flux_fitting_quadratic	quadratic fit to gas concentration over time
flux_fit_type	to check the type of fit
flux_flag_count	counts quality flags
flux_match	Matching continuously measured fluxes with measurement IDs and meta data
flux_param_exp	prepares text to print for flux_plot function
flux_param_lm	prepares text to print in flux_plot
flux_plot	plotting fluxes for visual evaluation
flux_plot_exp	plotting fluxes with exponential fit
flux_plot_flag	creates the flag column to be used by flux_plot
flux_plot_lin	plotting fluxes with linear fit
flux_plot_quadratic	plotting fluxes with a quadratic fit
flux_quality	assessing quality of slopes calculated with flux_fitting
flux_quality_exp	quality assessment for the slopes estimated by flux_fitting
flux_quality_lm	quality assessment for the slopes estimated by flux_fitting
record_liahovden	Measurements meta data at Liahovden
record_short	Measurements meta data
slopes0	Slopes for each flux
slopes0lin	Slopes for each flux
slopes0lin_flag	Slopes for each flux
slopes0_flag	Slopes for each flux
slopes0_temp	Slopes for each flux
slopes0_vol	Slopes for each flux
slopes0_vol_tube	Slopes for each flux
slopes30	Slopes for each flux
slopes30lin	Slopes for each flux
slopes30lin_flag	Slopes for each flux
slopes30qua	Slopes for each flux
slopes30qua_flag	Slopes for each flux
slopes30_flag	Slopes for each flux
slopes60	Slopes for each flux
slopes60lin	Slopes for each flux