Testing for Population Trends Using Low-Cost Ecological Count Data

Documentation for package ‘birp’ version 0.0.3

birp-package	Testing for Population Trends Using Low-Cost Ecological Count Data
assess_NB	Assess whether it is possible to use the Poisson model instead of the Negative Binomial (NB) model
birp	Creating a Birp Object
birp_data	Creating a Birp Data Object based on counts and efforts for a single method
birp_data_from_data_frame	Creating a Birp Data Object based on dataframe(s)
birp_data_from_file	Creating a Birp Data Object based on filenames
birp_from_command_line	Creating a Birp Object based on output files of command-line tool
plot.birp	Plotting a birp object
plot.birp_data	Plotting a birp_data Object
plot_epoch_pair	Plotting posterior estimates of gamma pairs
plot_mcmc	Plotting the MCMC chains
plot_trend	Plotting posterior trends
print.birp	Printing a birp object
print.birp_data	Printing a birp_data Object
simulate_birp	This function simulates a birp_data object for tidy data
simulate_birp_from_results	This function simulates a birp_data object using all parameter estimates, dimensionality (methods, locations, timepoints) and the total number of counts nu_ij of a birp object
summary.birp	Summarizing a birp object
summary.birp_data	This function summarizes a birp_data object