swaRmverse: Swarm Space Creation
Provides a pipeline for the comparative analysis of collective movement data (e.g. fish schools, bird flocks, baboon troops) by processing 2-dimensional positional data (x,y,t) from GPS trackers or computer vision tracking systems, discretizing events of collective motion, calculating a set of established metrics that characterize each event, and placing the events in a multi-dimensional swarm space constructed from these metrics. The swarm space concept, the metrics and data sets included are described in: Papadopoulou Marina, Furtbauer Ines, O'Bryan Lisa R., Garnier Simon, Georgopoulou Dimitra G., Bracken Anna M., Christensen Charlotte and King Andrew J. (2023) <doi:10.1098/rstb.2022.0068>.
| Version: | 0.1.0 |
| Depends: | R (≥ 3.5) |
| Imports: | parallel, pbapply, Rtsne, trackdf, swaRm, geosphere |
| Suggests: | knitr, rmarkdown, ggplot2, testthat (≥ 3.0.0), covr |
| Published: | 2024-03-26 |
| Author: | Marina Papadopoulou
 [aut, cre],
Simon Garnier
[ctb, cph] |
| Maintainer: | Marina Papadopoulou <m.papadopoulou.rug at gmail.com> |
| BugReports: | https://github.com/marinapapa/swaRmverse/issues |
| License: | GPL-3 |
| URL: | https://marinapapa.github.io/swaRmverse/, https://github.com/marinapapa/swaRmverse |
| NeedsCompilation: | no |
| Citation: | swaRmverse citation info |
| Materials: | README NEWS |
| CRAN checks: | swaRmverse results |
Documentation:
| Reference manual: | swaRmverse.pdf |
| Vignettes: |
1 - Data Preparation 2 - Data Analysis 3 - The Swarm-Verse |
Downloads:
| Package source: | swaRmverse_0.1.0.tar.gz |
| Windows binaries: | r-devel: swaRmverse_0.1.0.zip, r-release: swaRmverse_0.1.0.zip, r-oldrel: swaRmverse_0.1.0.zip |
| macOS binaries: | r-release (arm64): swaRmverse_0.1.0.tgz, r-oldrel (arm64): swaRmverse_0.1.0.tgz, r-release (x86_64): swaRmverse_0.1.0.tgz, r-oldrel (x86_64): swaRmverse_0.1.0.tgz |
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