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stRoke 23.9.1
Functions:
NEW: chunks_of_n()
uses split()
to
separate supplied vector or data frame into chunks of n. Flags to set if
all but the last chunks should be exactly size n, or if they should be
evenly sized of max n. Labels can be provided including regex pattern
for subject naming to include in chunk names.
NEW: n_chunks()
is the opposite of
chunks_of_n()
and is simply a wrapper for this function to
create list of n chunks based of provided vector or data frame.
NEW: str_extract()
will extract the substring of a
character string given by a regex pattern. Came to be as a helper
function for labelling chunks in chunks_of_n()
, but will be
useful on its own. Other functions doing the same exists, but this is my
take only using base R. Draws on
REDCapCAST::strsplitx()
, where splits can be performed
around a pattern.
NEW: add_padding()
was created out of frustration. I
wanted to add padding using sprintf("%0s",string)
, in
examples for the above, but it would fail when rendering on Windows. Say
hello to another function. Just very small. Defaults to adding leading
zeros, to get all string to equal length with the longer string
supplied.
Deprecation: ds2dd()
moved to
REDCapCAST::ds2dd()
as this is where it belongs.
stRoke 23.6.3
Bug
- Fixed
ds2dd()
bug after first practical
implementation.
stRoke 23.6.2
Functions:
- NEW:
pase_calc()
function calculates PASE scores from
raw questionnaire data. Gives sub scores as well and returns basic data
quality and completeness checks. Acknowledges the difference between the
scoring manual and the article by Washburn PA. et al. (1999) on
including sitting work in the score calculations.
Data:
- NEW:
pase
sample questionnaire data. Non-identifiable
and for use with the pase_calc()
function.
stRoke 23.6.1
Functions:
- NEW: ‘color_plot()’ function implements the ‘contrast_text()’ and is
very much inspired from ‘scales::show_col()’. Passes arguments to the
internal ‘contrast_text()’. Tests and all. Took way longer than
intended.
stRoke 23.4.1
Functions:
- NEW: ds2dd() creates a REDCap data dictionary based on a data set
for easy upload. A new vignette will be provided for example use. A
separate vignette has been added.
Notes:
- With newer additions to the package, these functions clearly has
their potential use also outside stroke research.
- A new vector with REDCap metadata headers has been added. Can be
called with data(metadata_names).
stRoke 23.1.8
Functions:
- write_ical() is an easy to use implementation of the package
library(calendar)
for easy conversion of spreadsheets to
ical object. Export an .ics file using
calendar::ic_write()
.
- contrast_text() calculates the best contrast text color for a given
background color. For use in graphics.
Notes:
- This is the first update on CRAN.
Documentation
stRoke 23.1.7
Notes:
- This is the version first published on CRAN as of 24.jan.2023.
- This is also the version first published to zenodo.org, and with
corresponding doi:
10.5281/zenodo.7572023.
Functions:
- redcap_read_tables() has been removed from the package for now.
Looking to add it back later as a minimal data acquisition tool.
stRoke 23.1.6 -
failed due to dependencies
New attempt at CRAN
submission
Functions:
- win_prop() added to implement the suggested methods in DOI:
10.1161/STROKEAHA.121.037744, as an implementation of “Tournament
Methods” also found in
library(genodds)
. The function is
based on the spreadsheet provided by the authors. A print.win_Prop is
also added for printing.
Notes:
- 23.1.5 failed on CRAN due to gt_plot(). This function has been
dropped. Find it as as_ggplot() elsewhere.
- agdamsbo/REDCapRITS added as “Additional_repositories”.
- Included references listed as authors.
stRoke 23.1.5
RELEASE ON CRAN - failed
stRoke 0.23.1.4
Functions:
- plot_olr() has been deprecated and removed.
- ci_plot() functionality extended to include logistic model
plotting.
- age_calc() use vapply() instead of sapply()
- gt_plot() function added to plot gt elements as ggplots. From bstfun. Not all done
and satisfied with the layout with patchwork.
Documentation
- Trying to complete all flags from goodpractice and inteRgrate
stRoke 0.23.1.3
Functions:
- files_filter() added. Simple function to get file names in path with
specified filter.
- updated cpr_dob to give warnings if format is not recognised and
return NAs.
- ci_plot() updated to actually handle binary factors. Uses glm(), not
lm().
Documentation:
- test, test and tests to satisfy codecov and, of course, ensure
higher quality
- changes to comply with goodpractices::gp()
…and probably some more.
stRoke 0.23.1.2
Functions:
- cpr_dob() now includes
format=
.
- Other minor updates.
Documentation:
- Two new vignettes
- Taking last steps in documenting before releasing on CRAN
Other:
stRoke 0.23.1.1
Functions:
- age_calc() now also outputs a numeric vector for units=“days”, and
not a character vector as difftime() would.
Documentation:
- Added a
NEWS.md
file to track changes to the
package.
- Added codecov
- Added tests with the help of gpttools
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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