shinyExprPortal: A Configurable 'shiny' Portal for Sharing Analysis of Molecular Expression Data

Enables deploying configuration file-based 'shiny' apps with minimal programming for interactive exploration and analysis showcase of molecular expression data. For exploration, supports visualization of correlations between rows of an expression matrix and a table of observations, such as clinical measures, and comparison of changes in expression over time. For showcase, enables visualizing the results of differential expression from package such as 'limma', co-expression modules from 'WGCNA' and lower dimensional projections.

Version:	1.1.0
Depends:	R (≥ 3.5.0)
Imports:	config, stats, utils, shiny, htmltools, markdown, cli, dplyr, tidyr, yaml, data.table, bslib, iheatmapr, vegawidget, DT, qvalue, parallel, Rfast, rlang, shinyhelper
Suggests:	testthat (≥ 3.0.0), whisker, knitr, rmarkdown, r2d3, kableExtra, RColorBrewer
Published:	2024-02-06
Author:	Rafael Henkin [cre, aut, cph]
Maintainer:	Rafael Henkin <r.henkin at qmul.ac.uk>
BugReports:	https://github.com/C4TB/shinyExprPortal/issues
License:	MIT + file LICENSE
URL:	https://c4tb.github.io/shinyExprPortal/, https://github.com/C4TB/shinyExprPortal
NeedsCompilation:	no
Materials:	README NEWS
CRAN checks:	shinyExprPortal results

Documentation:

Reference manual:	shinyExprPortal.pdf
Vignettes:	Full Configuration Guide Portal UI and Code Customization Data Preparation Guide Quick Start Guide for shinyExprPortal

Downloads:

Package source:	shinyExprPortal_1.1.0.tar.gz
Windows binaries:	r-devel: shinyExprPortal_1.1.0.zip, r-release: shinyExprPortal_1.1.0.zip, r-oldrel: shinyExprPortal_1.1.0.zip
macOS binaries:	r-release (arm64): shinyExprPortal_1.1.0.tgz, r-oldrel (arm64): shinyExprPortal_1.1.0.tgz, r-release (x86_64): shinyExprPortal_1.1.0.tgz, r-oldrel (x86_64): shinyExprPortal_1.1.0.tgz
Old sources:	shinyExprPortal archive

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