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seam: Sparse Extended Analysis of Modules

Provides tools for comparing groups using sparse principal component analysis (SPCA). Includes functions for identifying and visualizing influential variables, assessing variable selection stability through bootstrapping, and exploring associations with clinical traits. SPCA is implemented using the method described in <doi:10.1198/106186006X113430>.

Version: 0.1.0
Depends: R (≥ 4.1.0)
Imports: dplyr, elasticnet, ggplot2, graphics, rlang, stats, tidyr
Suggests: spelling, testthat (≥ 3.0.0)
Published: 2026-11-07
DOI: 10.32614/CRAN.package.seam (may not be active yet)
Author: Marketa Barac Makarova [aut, cre], Jan Kolacek [ctb]
Maintainer: Marketa Barac Makarova <marketa.makarova at mail.muni.cz>
BugReports: https://github.com/marketa-makarova/seam/issues
License: MIT + file LICENSE
URL: https://github.com/marketa-makarova/seam
NeedsCompilation: no
Language: en-US
Materials: README
CRAN checks: seam results

Documentation:

Reference manual: seam.html , seam.pdf

Downloads:

Package source: seam_0.1.0.tar.gz
Windows binaries: r-devel: seam_0.1.0.zip, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): seam_0.1.0.tgz, r-oldrel (arm64): seam_0.1.0.tgz, r-release (x86_64): seam_0.1.0.tgz, r-oldrel (x86_64): seam_0.1.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=seam to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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