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rChEA3: R Client for the 'ChEA3' Transcription Factor Enrichment API
Interface to the 'ChEA3' transcription factor enrichment API.
'ChEA3' integrates evidence from ChIP-seq, co-expression, and literature
resources to prioritize transcription factors regulating a given set
of genes. This package provides convenient R functions to query the API,
retrieve ranked results across collections (including integrated scores),
and standardize output for downstream analysis in R/Bioconductor workflows.
See <https://maayanlab.cloud/chea3/> or Keenan (2019) <doi:10.1093/nar/gkz446>
for further details.
| Version: |
0.2.0 |
| Depends: |
R (≥ 4.1.0) |
| Imports: |
cli, crayon, dplyr, ggplot2, httr, jsonlite, lubridate, rlang, tidyselect, writexl |
| Suggests: |
knitr, readxl, rmarkdown, testthat (≥ 3.0.0) |
| Published: |
2025-10-15 |
| DOI: |
10.32614/CRAN.package.rChEA3 (may not be active yet) |
| Author: |
Christophe Tav 
[aut, cre] |
| Maintainer: |
Christophe Tav <christophe.tav at gmail.com> |
| BugReports: |
https://github.com/ckntav/rChEA3/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://github.com/ckntav/rChEA3, https://ckntav.github.io/rChEA3/ |
| NeedsCompilation: |
no |
| Materials: |
README, NEWS |
| CRAN checks: |
rChEA3 results |
Documentation:
Downloads:
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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