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microseq: Basic Biological Sequence Handling

Basic functions for microbial sequence data analysis. The idea is to use generic R data structures as much as possible, making R data wrangling possible also for sequence data.

Version: 2.1.6
Depends: R (≥ 4.0.0), tibble, stringr, dplyr, data.table, rlang
Imports: Rcpp (≥ 0.12.0)
LinkingTo: Rcpp (≥ 0.12.0)
Published: 2023-08-21
Author: Lars Snipen, Kristian Hovde Liland
Maintainer: Lars Snipen <lars.snipen at nmbu.no>
License: GPL-2
NeedsCompilation: yes
CRAN checks: microseq results

Documentation:

Reference manual: microseq.pdf
Vignettes: The microseq package vignette

Downloads:

Package source: microseq_2.1.6.tar.gz
Windows binaries: r-devel: microseq_2.1.6.zip, r-release: microseq_2.1.6.zip, r-oldrel: microseq_2.1.6.zip
macOS binaries: r-release (arm64): microseq_2.1.6.tgz, r-oldrel (arm64): microseq_2.1.6.tgz, r-release (x86_64): microseq_2.1.6.tgz, r-oldrel (x86_64): microseq_2.1.6.tgz
Old sources: microseq archive

Reverse dependencies:

Reverse depends: microclass, micropan
Reverse imports: microcontax

Linking:

Please use the canonical form https://CRAN.R-project.org/package=microseq to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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