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Implementation of the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group.
| Version: | 1.5 |
| Depends: | pamr, impute, iC10TrainingData |
| Published: | 2019-02-08 |
| Author: | Oscar M Rueda |
| Maintainer: | Oscar M. Rueda <Oscar.Rueda at cruk.cam.ac.uk> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | iC10 results |
| Reference manual: | iC10.pdf |
| Package source: | iC10_1.5.tar.gz |
| Windows binaries: | r-devel: iC10_1.5.zip, r-release: iC10_1.5.zip, r-oldrel: iC10_1.5.zip |
| macOS binaries: | r-release (arm64): iC10_1.5.tgz, r-oldrel (arm64): iC10_1.5.tgz, r-release (x86_64): iC10_1.5.tgz, r-oldrel (x86_64): iC10_1.5.tgz |
| Old sources: | iC10 archive |
| Reverse depends: | genefu |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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