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Estimates the shape and volume of high-dimensional datasets and performs set operations: intersection / overlap, union, unique components, inclusion test, and hole detection. Uses stochastic geometry approach to high-dimensional kernel density estimation, support vector machine delineation, and convex hull generation. Applications include modeling trait and niche hypervolumes and species distribution modeling.
| Version: | 3.1.4 |
| Depends: | Rcpp, methods, R (≥ 3.5.0) |
| Imports: | raster, maps, MASS, geometry, ks, hitandrun, pdist, fastcluster, compiler, e1071, progress, mvtnorm, data.table, terra, sp, foreach, doParallel, parallel, ggplot2, pbapply, palmerpenguins, purrr, dplyr, caret |
| LinkingTo: | Rcpp, RcppArmadillo, progress |
| Suggests: | rgl, magick, alphahull, knitr, rmarkdown, gridExtra |
| Published: | 2024-05-01 |
| Author: | Benjamin Blonder, with contributions from Cecina Babich Morrow, Stuart Brown, Gregoire Butruille, Daniel Chen, Alex Laini, and David J. Harris |
| Maintainer: | Benjamin Blonder <benjamin.blonder at berkeley.edu> |
| BugReports: | https://github.com/bblonder/hypervolume/issues |
| License: | GPL-3 |
| URL: | https://github.com/bblonder/hypervolume |
| NeedsCompilation: | yes |
| CRAN checks: | hypervolume results |
| Reference manual: | hypervolume.pdf |
| Vignettes: |
Hypervolume-Resampling Introduction to occupancy |
| Package source: | hypervolume_3.1.4.tar.gz |
| Windows binaries: | r-devel: hypervolume_3.1.4.zip, r-release: hypervolume_3.1.4.zip, r-oldrel: hypervolume_3.1.4.zip |
| macOS binaries: | r-release (arm64): hypervolume_3.1.4.tgz, r-oldrel (arm64): hypervolume_3.1.4.tgz, r-release (x86_64): hypervolume_3.1.4.tgz, r-oldrel (x86_64): hypervolume_3.1.4.tgz |
| Old sources: | hypervolume archive |
| Reverse imports: | BAT, cati, Ostats, raptr |
| Reverse suggests: | ENMTools, TreeDist |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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