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Fits models for genotypic disequilibria, as described in Huttley and Wilson (2000) <doi:10.1093/genetics/156.4.2127>, Weir (1996) and Weir and Wilson (1986). Contrast terms are available that account for first order interactions between loci. Also implements, for a single locus in a single population, a conditional exact test for Hardy-Weinberg equilibrium.
| Version: | 0.67-3 |
| Depends: | R (≥ 2.0) |
| Published: | 2023-08-21 |
| Author: | John Maindonald, with \code{hwexact()} from Randall Johnson. |
| Maintainer: | John Maindonald <jhmaindonald at gmail.com> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| Copyright: | (c) John Curtin Research School of Medical Sciences and Centre for Mathematics and Its Applications, The Australian National University |
| URL: | https://github.com/jhmaindonald/hwde |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | hwde results |
| Reference manual: | hwde.pdf |
| Vignettes: |
hwde: An R Package for Tests and Models for Genotypic Disequilibria |
| Package source: | hwde_0.67-3.tar.gz |
| Windows binaries: | r-devel: hwde_0.67-3.zip, r-release: hwde_0.67-3.zip, r-oldrel: hwde_0.67-3.zip |
| macOS binaries: | r-release (arm64): hwde_0.67-3.tgz, r-oldrel (arm64): hwde_0.67-3.tgz, r-release (x86_64): hwde_0.67-3.tgz, r-oldrel (x86_64): hwde_0.67-3.tgz |
| Old sources: | hwde archive |
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