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The goal of denguedatahub is to provide the research
community with a unified dataset by collecting worldwide dengue-related
data, merged with exogenous variables helpful for a better understanding
of the spread of dengue and the reproducibility of research.
Check out the website at https://denguedatahub.netlify.app/
You can install the development version of denguedatahub from GitHub with:
install.packages("denguedatahub")# install.packages("devtools")
devtools::install_github("thiyangt/denguedatahub")This is a basic example which shows you how to solve a common problem:
library(tsibble)
#>
#> Attaching package: 'tsibble'
#> The following objects are masked from 'package:base':
#>
#> intersect, setdiff, unionlibrary(denguedatahub)
head(level_of_risk)
#> # A tibble: 6 × 3
#> country level_of_risk region
#> <fct> <fct> <fct>
#> 1 Angola Sporadic/Uncertain Africa
#> 2 Benin Sporadic/Uncertain Africa
#> 3 Burkina Faso Frequent/Continuous Africa
#> 4 Burundi Sporadic/Uncertain Africa
#> 5 Cameroon Sporadic/Uncertain Africa
#> 6 Cape Verde Sporadic/Uncertain Africahead(srilanka_weekly_data)
#> # A tibble: 6 × 6
#> year week start.date end.date district cases
#> <dbl> <dbl> <date> <date> <chr> <dbl>
#> 1 2006 52 2006-12-23 2006-12-29 Colombo 71
#> 2 2006 52 2006-12-23 2006-12-29 Gampaha 12
#> 3 2006 52 2006-12-23 2006-12-29 Kalutara 12
#> 4 2006 52 2006-12-23 2006-12-29 Kandy 20
#> 5 2006 52 2006-12-23 2006-12-29 Matale 4
#> 6 2006 52 2006-12-23 2006-12-29 NuwaraEliya 1library(tidyverse)
world_annual |>
filter(region=="Afghanistan") |>
head()
#> long lat group order region subregion code year incidence
#> 1 74.89131 37.23164 2 12 Afghanistan <NA> AFG 1990 23371
#> 2 74.89131 37.23164 2 12 Afghanistan <NA> AFG 1991 25794
#> 3 74.89131 37.23164 2 12 Afghanistan <NA> AFG 1992 29766
#> 4 74.89131 37.23164 2 12 Afghanistan <NA> AFG 1993 32711
#> 5 74.89131 37.23164 2 12 Afghanistan <NA> AFG 1994 34268
#> 6 74.89131 37.23164 2 12 Afghanistan <NA> AFG 1995 35823
#> dengue.present
#> 1 yes
#> 2 yes
#> 3 yes
#> 4 yes
#> 5 yes
#> 6 yesThese binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.