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blaster: Native R Implementation of an Efficient BLAST-Like Algorithm

Implementation of an efficient BLAST-like sequence comparison algorithm, written in 'C++11' and using native R datatypes. Blaster is based on 'nsearch' - Schmid et al (2018) <doi:10.1101/399782>.

Version: 1.0.7
Imports: Rcpp (≥ 1.0.5)
LinkingTo: Rcpp
Published: 2023-08-22
Author: Manu Tamminen ORCID iD [aut, cre], Timothy Julian ORCID iD [aut], Aditya Jeevennavar ORCID iD [aut], Steven Schmid [aut]
Maintainer: Manu Tamminen <mavatam at utu.fi>
License: BSD_3_clause + file LICENSE
URL: https://github.com/tamminenlab/blaster
NeedsCompilation: yes
SystemRequirements: C++
Materials: README
CRAN checks: blaster results

Documentation:

Reference manual: blaster.pdf

Downloads:

Package source: blaster_1.0.7.tar.gz
Windows binaries: r-devel: blaster_1.0.7.zip, r-release: blaster_1.0.7.zip, r-oldrel: blaster_1.0.7.zip
macOS binaries: r-release (arm64): blaster_1.0.7.tgz, r-oldrel (arm64): blaster_1.0.7.tgz, r-release (x86_64): blaster_1.0.7.tgz, r-oldrel (x86_64): blaster_1.0.7.tgz
Old sources: blaster archive

Reverse dependencies:

Reverse imports: ClustIRR

Linking:

Please use the canonical form https://CRAN.R-project.org/package=blaster to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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