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avotrex: A Global Dataset of Anthropogenic Extinct Birds and their Traits: Phylogeny Builder

Grafts the extinct bird species from the 'Avotrex' database (Sayol et al., in review) on to the 'BirdTree' phylogenies <https://birdtree.org>, using a set of different commands.

Version: 1.0.0
Depends: R (≥ 4.0.0)
Imports: ape, doParallel, doSNOW, dplyr, foreach, parallel, phytools, snow, stringr, tidytree (≥ 0.4.6), utils
Suggests: testthat, markdown, knitr, rmarkdown, covr
Published: 2024-04-12
Author: Joseph Wayman ORCID iD [aut, cre], Thomas J. Matthews ORCID iD [aut], Paul Dufour [ctb], Ferran Sayol [ctb]
Maintainer: Joseph Wayman <j.wayman at bham.ac.uk>
License: GPL-3
NeedsCompilation: no
Citation: avotrex citation info
Materials: README
CRAN checks: avotrex results

Documentation:

Reference manual: avotrex.pdf
Vignettes: avotrex R Package

Downloads:

Package source: avotrex_1.0.0.tar.gz
Windows binaries: r-devel: avotrex_1.0.0.zip, r-release: avotrex_1.0.0.zip, r-oldrel: avotrex_1.0.0.zip
macOS binaries: r-release (arm64): avotrex_1.0.0.tgz, r-oldrel (arm64): avotrex_1.0.0.tgz, r-release (x86_64): avotrex_1.0.0.tgz, r-oldrel (x86_64): avotrex_1.0.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=avotrex to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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