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SeqAlignR: Sequence Alignment and Visualization Tool

Computes the optimal alignment of two character sequences. Visualizes the result of the alignment in a matrix plot. Needleman, Saul B.; Wunsch, Christian D. (1970) "A general method applicable to the search for similarities in the amino acid sequence of two proteins" <doi:10.1016/0022-2836(70)90057-4>.

Version: 0.1.1
Imports: plot.matrix, graphics
Published: 2024-02-07
Author: Leonard Persson Norblad ORCID iD [aut, cre], Kamil Slowikowski ORCID iD [ctb]
Maintainer: Leonard Persson Norblad <leonard.norblad at gmail.com>
License: GPL-3
NeedsCompilation: no
CRAN checks: SeqAlignR results

Documentation:

Reference manual: SeqAlignR.pdf

Downloads:

Package source: SeqAlignR_0.1.1.tar.gz
Windows binaries: r-devel: SeqAlignR_0.1.1.zip, r-release: SeqAlignR_0.1.1.zip, r-oldrel: SeqAlignR_0.1.1.zip
macOS binaries: r-release (arm64): SeqAlignR_0.1.1.tgz, r-oldrel (arm64): SeqAlignR_0.1.1.tgz, r-release (x86_64): SeqAlignR_0.1.1.tgz, r-oldrel (x86_64): SeqAlignR_0.1.1.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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