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Scelestial infers a lineage tree from single-cell DNA mutation matrix. It generates a tree with approximately maximum parsimony through a Steiner tree approximation algorithm.
| Version: | 1.0.4 |
| Imports: | Rcpp (≥ 1.0.1) |
| LinkingTo: | Rcpp |
| Suggests: | igraph, knitr, rmarkdown, stringr, seqinr, spelling |
| Published: | 2023-11-30 |
| Author: | Mohammad Hadi Foroughmand Araabi [aut, cre], Sama Goliaei [aut, ctb], Alice McHardy [ctb] |
| Maintainer: | Mohammad Hadi Foroughmand Araabi <foroughmand at gmail.com> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | yes |
| Language: | en-US |
| Materials: | NEWS |
| CRAN checks: | RScelestial results |
| Reference manual: | RScelestial.pdf |
| Vignettes: |
RScelestial Vignette |
| Package source: | RScelestial_1.0.4.tar.gz |
| Windows binaries: | r-devel: RScelestial_1.0.4.zip, r-release: RScelestial_1.0.4.zip, r-oldrel: RScelestial_1.0.4.zip |
| macOS binaries: | r-release (arm64): RScelestial_1.0.4.tgz, r-oldrel (arm64): RScelestial_1.0.4.tgz, r-release (x86_64): RScelestial_1.0.4.tgz, r-oldrel (x86_64): RScelestial_1.0.4.tgz |
| Old sources: | RScelestial archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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