The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.

FARDEEP: Fast and Robust Deconvolution of Tumor Infiltrating Lymphocyte from Expression Profiles using Least Trimmed Squares

Using the idea of least trimmed square, it could automatically detects and removes outliers from data before estimating the coefficients. It is a robust machine learning tool which can be applied to gene-expression deconvolution technique. Yuning Hao, Ming Yan, Blake R. Heath, Yu L. Lei and Yuying Xie (2019) <doi:10.1101/358366>.

Version: 1.0.1
Depends: R (≥ 3.3.0)
Imports: nnls (≥ 1.4), stats, preprocessCore
Published: 2019-04-24
Author: Yuning Hao [aut], Ming Yan [aut], Blake R. Heath [aut], Yu L. Lei [aut], Yuying Xie [aut, cre]
Maintainer: Yuying Xie <xyy at egr.msu.edu>
License: MIT + file LICENSE
NeedsCompilation: no
CRAN checks: FARDEEP results

Documentation:

Reference manual: FARDEEP.pdf

Downloads:

Package source: FARDEEP_1.0.1.tar.gz
Windows binaries: r-devel: FARDEEP_1.0.1.zip, r-release: FARDEEP_1.0.1.zip, r-oldrel: FARDEEP_1.0.1.zip
macOS binaries: r-release (arm64): FARDEEP_1.0.1.tgz, r-oldrel (arm64): FARDEEP_1.0.1.tgz, r-release (x86_64): FARDEEP_1.0.1.tgz, r-oldrel (x86_64): FARDEEP_1.0.1.tgz

Reverse dependencies:

Reverse suggests: SCdeconR

Linking:

Please use the canonical form https://CRAN.R-project.org/package=FARDEEP to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.