DiscreteFDR: Multiple Testing Procedures with Adaptation for Discrete Tests

Multiple testing procedures described in the paper Döhler, Durand and Roquain (2018) "New FDR bounds for discrete and heterogeneous tests" <doi:10.1214/18-EJS1441>. The main procedures of the paper (HSU and HSD), their adaptive counterparts (AHSU and AHSD), and the HBR variant are available and are coded to take as input a set of observed p-values and their discrete support under the null. A function to compute such p-values and supports for Fisher's exact tests is also provided, along with a wrapper allowing to apply discrete procedures directly from contingency tables.

Version:	1.3.7
Depends:	R (≥ 3.00)
Imports:	Rcpp (≥ 1.0.1), methods, lifecycle
LinkingTo:	Rcpp
Suggests:	R.rsp, knitr, rmarkdown
Published:	2024-02-08
Author:	Sebastian Döhler [aut, ctb], Florian Junge [aut, ctb, cre], Guillermo Durand [aut, ctb], Etienne Roquain [ctb], Christina Kihn [ctb]
Maintainer:	Florian Junge <diso.fbmn at h-da.de>
BugReports:	https://github.com/DISOhda/DiscreteFDR/issues
License:	GPL-3
URL:	https://github.com/DISOhda/DiscreteFDR
NeedsCompilation:	yes
Materials:	NEWS
In views:	Omics
CRAN checks:	DiscreteFDR results

Documentation:

Reference manual:	DiscreteFDR.pdf
Vignettes:	DiscreteFDR: An R package for controlling the false discovery rate for discrete test statistics Introduction to DiscreteFDR

Downloads:

Package source:	DiscreteFDR_1.3.7.tar.gz
Windows binaries:	r-devel: DiscreteFDR_1.3.7.zip, r-release: DiscreteFDR_1.3.7.zip, r-oldrel: DiscreteFDR_1.3.7.zip
macOS binaries:	r-release (arm64): DiscreteFDR_1.3.7.tgz, r-oldrel (arm64): DiscreteFDR_1.3.7.tgz, r-release (x86_64): DiscreteFDR_1.3.7.tgz, r-oldrel (x86_64): DiscreteFDR_1.3.7.tgz
Old sources:	DiscreteFDR archive

Reverse dependencies:

Reverse depends:	FDX
Reverse suggests:	sgof

Linking:

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