The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.

CongreveLamsdell2016

This R package provides data and analyses that accompany the paper

• Smith, M. R. (2019), Bayesian and parsimony approaches reconstruct informative trees from simulated morphological datasets, Biological Letters, 15:20180632, doi:10.1098/rsbl.2018.0632.

It incorporates data from:

• Congreve, C. R., and J. C. Lamsdell. 2016. Implied weighting and its utility in palaeontological datasets: a study using modelled phylogenetic matrices. Palaeontology, 59:447–462. doi:10.1111/pala.12236.

• Congreve, C. R., and J. C. Lamsdell. 2016. Data from: Implied weighting and its utility in palaeontological datasets: a study using modelled phylogenetic matrices. Dryad Digital Repository, doi:10.5061/dryad.7dq0j.

Some of these data are used in the Quartet package.

Equivalent data and analyses from data simulated by O’Reilly et al. (2016) are available at ms609.github.io/OReillyEtAl2016.

Installation

Install and load the library from CRAN as follows:

install.packages('CongreveLamsdell2016')
library('CongreveLamsdell2016')

Documentation

The package includes documentation and visualizations of its results:

• R Package manual: PDF

• How to conduct the analyses: HTML | PDF

• Node support comparisons: HTML | PDF

• Comparisons of phylogenetic methods: HTML | PDF

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.