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Bisulfite-treated RNA non-conversion in a set of samples is analysed as follows : each sample's non-conversion distribution is identified to a Poisson distribution. P-values adjusted for multiple testing are calculated in each sample. Combined non-conversion P-values and standard errors are calculated on the intersection of the set of samples. For further details, see C Legrand, F Tuorto, M Hartmann, R Liebers, D Jakob, M Helm and F Lyko (2017) <doi:10.1101/gr.210666.116>.
| Version: | 0.2.2 |
| Depends: | R (≥ 3.3.2) |
| Imports: | MASS, graphics, stats, utils |
| Suggests: | IHW, testthat |
| Published: | 2017-12-15 |
| Author: | C Legrand |
| Maintainer: | Carine Legrand <c.legrand at dkfz.de> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | no |
| Citation: | BisRNA citation info |
| CRAN checks: | BisRNA results |
| Reference manual: | BisRNA.pdf |
| Package source: | BisRNA_0.2.2.tar.gz |
| Windows binaries: | r-devel: BisRNA_0.2.2.zip, r-release: BisRNA_0.2.2.zip, r-oldrel: BisRNA_0.2.2.zip |
| macOS binaries: | r-release (arm64): BisRNA_0.2.2.tgz, r-oldrel (arm64): BisRNA_0.2.2.tgz, r-release (x86_64): BisRNA_0.2.2.tgz, r-oldrel (x86_64): BisRNA_0.2.2.tgz |
| Old sources: | BisRNA archive |
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