CRAN Package Check Results for Package timeEL

Last updated on 2024-10-20 05:49:16 CEST.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	0.9.1	5.36	218.92	224.28	OK
r-devel-linux-x86_64-debian-gcc	0.9.1	3.27	126.11	129.38	OK
r-devel-linux-x86_64-fedora-clang	0.9.1			388.21	OK
r-devel-linux-x86_64-fedora-gcc	0.9.1			209.05	ERROR
r-devel-windows-x86_64	0.9.1	5.00	180.00	185.00	OK
r-patched-linux-x86_64	0.9.1	5.13	194.01	199.14	OK
r-release-linux-x86_64	0.9.1	5.11	195.98	201.09	OK
r-release-macos-arm64	0.9.1			88.00	OK
r-release-macos-x86_64	0.9.1			253.00	OK
r-release-windows-x86_64	0.9.1	7.00	181.00	188.00	OK
r-oldrel-macos-arm64	0.9.1			76.00	OK
r-oldrel-macos-x86_64	0.9.1			207.00	OK
r-oldrel-windows-x86_64	0.9.1	5.00	224.00	229.00	OK

Check Details

Version: 0.9.1
Check: tests
Result: ERROR Running ‘testthat.R’ [152s/153s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(timeEL) > > test_check("timeEL") [ FAIL 2 | WARN 0 | SKIP 0 | PASS 29 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-KMwithSE.R:32:5'): Check the internal Greenwood variance computation of KM against that of prodlim ── Error in `cbind(idxM, pidxM)`: cannot get data pointer of 'NULL' objects Backtrace: ▆ 1. └─prodlim::SimSurv(3000) at test-KMwithSE.R:32:5 2. └─prodlim::survModel() 3. └─lava::lvm(~eventtime + censtime) 4. ├─lava::`regression<-`(`*tmp*`, messages = messages, value = myvar) 5. └─lava:::`regression<-.lvm`(`*tmp*`, messages = messages, value = myvar) 6. └─lava::procformula(object, value, ...) 7. ├─lava::`exogenous<-`(...) 8. └─lava:::`exogenous<-.lvm`(...) 9. └─lava::reindex(x) 10. └─lava:::mat.lvm(x, res) 11. └─base::cbind(idxM, pidxM) ── Error ('test-KaplanMeier.R:89:5'): Compare to km.ci results ───────────────── Error in `cbind(idxM, pidxM)`: cannot get data pointer of 'NULL' objects Backtrace: ▆ 1. └─prodlim::SimSurv(50) at test-KaplanMeier.R:89:5 2. └─prodlim::survModel() 3. └─lava::lvm(~eventtime + censtime) 4. ├─lava::`regression<-`(`*tmp*`, messages = messages, value = myvar) 5. └─lava:::`regression<-.lvm`(`*tmp*`, messages = messages, value = myvar) 6. └─lava::procformula(object, value, ...) 7. ├─lava::`exogenous<-`(...) 8. └─lava:::`exogenous<-.lvm`(...) 9. └─lava::reindex(x) 10. └─lava:::mat.lvm(x, res) 11. └─base::cbind(idxM, pidxM) [ FAIL 2 | WARN 0 | SKIP 0 | PASS 29 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc