CRAN Package Check Results for Package survivalVignettes

Last updated on 2026-10-24 11:51:16 CEST.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	0.1.6	4.11	60.49	64.60	OK
r-devel-linux-x86_64-debian-gcc	0.1.6	3.01	36.60	39.61	ERROR
r-devel-linux-x86_64-fedora-clang	0.1.6			61.35	OK
r-devel-linux-x86_64-fedora-gcc	0.1.6			51.48	OK
r-devel-windows-x86_64	0.1.6	5.00	81.00	86.00	OK
r-patched-linux-x86_64	0.1.6	4.02	55.32	59.34	OK
r-release-linux-x86_64	0.1.6	3.95	55.86	59.81	OK
r-release-macos-arm64	0.1.6	1.00	23.00	24.00	OK
r-release-macos-x86_64	0.1.6	3.00	80.00	83.00	OK
r-release-windows-x86_64	0.1.6	6.00	74.00	80.00	OK
r-oldrel-macos-arm64	0.1.6				OK
r-oldrel-macos-x86_64	0.1.6	3.00	77.00	80.00	OK
r-oldrel-windows-x86_64	0.1.6	8.00	89.00	97.00	OK

Check Details

Version: 0.1.6
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘pseudo.Rmd’ using rmarkdown Quitting from pseudo.Rmd:277-287 [test3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `a$specials[[i]]`: ! subscript out of bounds --- Backtrace: ▆ 1. ├─survival::survfit(cfit3, newdata = list(x = c("Maintained", "Nonmaintained"))) 2. └─survival:::survfit.coxph(...) 3. └─survival:::model.matrix.coxph(object, data = mf) 4. └─stats::delete.response(object$terms) 5. └─stats (local) off(a$specials[[i]]) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'pseudo.Rmd' failed with diagnostics: subscript out of bounds --- failed re-building ‘pseudo.Rmd’ --- re-building ‘ridge.Rmd’ using rmarkdown Quitting from ridge.Rmd:113-126 [pass5] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `a$specials[[i]]`: ! subscript out of bounds --- Backtrace: ▆ 1. ├─stats::predict(cfit3) 2. ├─survival:::predict.coxph.penal(cfit3) 3. ├─base::NextMethod("predict", object, ...) 4. └─survival:::predict.coxph(cfit3) 5. └─stats::delete.response(Terms) 6. └─stats (local) off(a$specials[[i]]) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'ridge.Rmd' failed with diagnostics: subscript out of bounds --- failed re-building ‘ridge.Rmd’ --- re-building ‘royston.Rmd’ using rmarkdown Quitting from royston.Rmd:144-147 [termplot] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `a$specials[[i]]`: ! subscript out of bounds --- Backtrace: ▆ 1. └─stats::termplot(...) 2. ├─stats::predict(model, type = "terms", se.fit = se, terms = terms) 3. └─survival:::predict.coxph(...) 4. └─stats::delete.response(Terms) 5. └─stats (local) off(a$specials[[i]]) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'royston.Rmd' failed with diagnostics: subscript out of bounds --- failed re-building ‘royston.Rmd’ --- re-building ‘tutorial.Rmd’ using rmarkdown Quitting from tutorial.Rmd:325-331 [aidscurve] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `a$specials[[i]]`: ! subscript out of bounds --- Backtrace: ▆ 1. ├─survival::survfit(cfit0, newdata = dummy) 2. └─survival:::survfit.coxphms(cfit0, newdata = dummy) 3. ├─stats::model.matrix(object, data = mf) 4. └─survival:::model.matrix.coxph(object, data = mf) 5. └─stats::delete.response(object$terms) 6. └─stats (local) off(a$specials[[i]]) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tutorial.Rmd' failed with diagnostics: subscript out of bounds --- failed re-building ‘tutorial.Rmd’ SUMMARY: processing the following files failed: ‘pseudo.Rmd’ ‘ridge.Rmd’ ‘royston.Rmd’ ‘tutorial.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc