Last updated on 2026-02-06 01:50:37 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | OK | ||||
| r-devel-linux-x86_64-fedora-clang | 1.0.0 | 8.00 | 473.29 | 481.29 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.0.0 | 8.00 | 410.57 | 418.57 | OK | |
| r-devel-windows-x86_64 | 1.0.0 | 7.00 | 260.00 | 267.00 | OK | |
| r-patched-linux-x86_64 | 1.0.0 | 6.12 | 281.44 | 287.56 | OK | |
| r-release-macos-arm64 | 1.0.0 | 1.00 | 69.00 | 70.00 | ERROR | |
| r-release-macos-x86_64 | 1.0.0 | 4.00 | 370.00 | 374.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.0.0 | 1.00 | 73.00 | 74.00 | ERROR | |
| r-oldrel-macos-x86_64 | 1.0.0 | 4.00 | 356.00 | 360.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.0.0 | 8.00 | 305.00 | 313.00 | OK |
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [76s/48s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(fluxfixer)
>
> test_check("fluxfixer")
--- dTmax calculation by the SP method started
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--- dTmax calculation by the MW and DR methods finished
Zero-flow condition estimation started
--- dTmax calculation by the SP method started
--- dTmax calculation by the SP method finished
--- dTmax calculation by the PD and ED methods started
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--- dTmax calculation by the MW and DR methods finished
--- dTmax time series aggregation started
--- dTmax time series aggregation finished
Zero-flow condition estimation finished
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1155032912, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1157711388, Hyperparameter set: [3, 5, 0.1]
Random forest outlier detection started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.116118315, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1164037447, Hyperparameter set: [3, 5, 0.1]
--- Optimal hyperparameter set: [2, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest outlier detection finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1176580164, Hyperparameter set: [2, 5, 1]
--- MSE: 0.1187078861, Hyperparameter set: [3, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest-based gap-filling finished
Saving _problems/test-remove_statistical_outlier-32.R
Z-score outlier detection started
--- 5 Z-score outliers were detected
--- 1 Z-score outlier was detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending was not applied
Time series retrieval finished
*** Fluxfixer started running ***
Manual error value removal was not applied
Absolute limits test finished
Short-term drift correction finished
High frequency noise filtering was not applied
Z-score outlier detection started
--- 4 Z-score outliers were detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Random forest outlier detection started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0738704162, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.0728236193, Hyperparameter set: [3, 5, 0.1]
--- MSE: 0.0722613642, Hyperparameter set: [4, 5, 0.1]
--- MSE: 0.0723258816, Hyperparameter set: [5, 5, 0.1]
--- MSE: 0.0727737792, Hyperparameter set: [6, 5, 0.1]
--- Optimal hyperparameter set: [4, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest outlier detection finished
Reference value definition started
--- Reference average of target time series: 11.4773826234913
--- Reference standard deviation of target time series: 1.66431731873025
Reference value definition finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0321570222, Hyperparameter set: [2, 5, 1]
--- MSE: 0.0323715708, Hyperparameter set: [3, 5, 1]
--- MSE: 0.0327464067, Hyperparameter set: [4, 5, 1]
--- MSE: 0.0327651185, Hyperparameter set: [5, 5, 1]
--- MSE: 0.0332510679, Hyperparameter set: [6, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest-based gap-filling finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending finished
Time series retrieval finished
Quality-control flag determination finished
Zero-flow condition estimation started
--- dTmax calculation by the SP method started
--- dTmax calculation by the SP method finished
--- dTmax time series aggregation started
--- dTmax time series aggregation finished
Zero-flow condition estimation finished
Fd calculation process started
--- Heartwood correction was not applied
--- Fd calculation by the SP method finished
Fd calculation process finished
*** Fluxfixer finished running successfully ***
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-remove_statistical_outlier.R:32:3'): modifying short-term drifts works ──
Expected `abs(corrected[101] - 1)` < 0.1.
Actual comparison: 1000.0 >= 0.1
Difference: 999.9 >= 0
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-arm64
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [197s/273s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(fluxfixer)
>
> test_check("fluxfixer")
--- dTmax calculation by the SP method started
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--- dTmax calculation by the MW and DR methods finished
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--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1155032912, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1157711388, Hyperparameter set: [3, 5, 0.1]
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--- Optimal hyperparameter set: [2, 5, 0.1]
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--- MSE: 0.1187078861, Hyperparameter set: [3, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
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Saving _problems/test-remove_statistical_outlier-30.R
Z-score outlier detection started
--- 5 Z-score outliers were detected
--- 1 Z-score outlier was detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending was not applied
Time series retrieval finished
*** Fluxfixer started running ***
Manual error value removal was not applied
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--- 4 Z-score outliers were detected
--- No Z-score outlier was detected
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--- MSE: 0.0738723153, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.0728156744, Hyperparameter set: [3, 5, 0.1]
--- MSE: 0.0722560085, Hyperparameter set: [4, 5, 0.1]
--- MSE: 0.0722657316, Hyperparameter set: [5, 5, 0.1]
--- MSE: 0.072790208, Hyperparameter set: [6, 5, 0.1]
--- Optimal hyperparameter set: [4, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
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Reference value definition started
--- Reference average of target time series: 11.4773826234913
--- Reference standard deviation of target time series: 1.66431731873025
Reference value definition finished
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--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0320510997, Hyperparameter set: [2, 5, 1]
--- MSE: 0.0322984728, Hyperparameter set: [3, 5, 1]
--- MSE: 0.0323055008, Hyperparameter set: [4, 5, 1]
--- MSE: 0.0325841009, Hyperparameter set: [5, 5, 1]
--- MSE: 0.0330064573, Hyperparameter set: [6, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
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--- Detrending finished
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Fd calculation process started
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Fd calculation process finished
*** Fluxfixer finished running successfully ***
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-remove_statistical_outlier.R:28:3'): modifying short-term drifts works ──
Error in `data.frame(time = vctr_time, dT = vctr_target, dT_mod = vctr_target)`: arguments imply differing number of rows: 299, 300
Backtrace:
▆
1. └─fluxfixer::modify_short_drift(...) at test-remove_statistical_outlier.R:28:3
2. └─base::data.frame(time = vctr_time, dT = vctr_target, dT_mod = vctr_target)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [75s/47s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(fluxfixer)
>
> test_check("fluxfixer")
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--- dTmax calculation by the PD and ED methods finished
--- dTmax calculation by the MW and DR methods started
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--- dTmax calculation by the MW and DR methods finished
--- dTmax time series aggregation started
--- dTmax time series aggregation finished
Zero-flow condition estimation finished
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1155032912, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1157711388, Hyperparameter set: [3, 5, 0.1]
Random forest outlier detection started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.116118315, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1164037447, Hyperparameter set: [3, 5, 0.1]
--- Optimal hyperparameter set: [2, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest outlier detection finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1176580164, Hyperparameter set: [2, 5, 1]
--- MSE: 0.1187078861, Hyperparameter set: [3, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest-based gap-filling finished
Saving _problems/test-remove_statistical_outlier-32.R
Z-score outlier detection started
--- 5 Z-score outliers were detected
--- 1 Z-score outlier was detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending was not applied
Time series retrieval finished
*** Fluxfixer started running ***
Manual error value removal was not applied
Absolute limits test finished
Short-term drift correction finished
High frequency noise filtering was not applied
Z-score outlier detection started
--- 4 Z-score outliers were detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Random forest outlier detection started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0738599585, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.0728341783, Hyperparameter set: [3, 5, 0.1]
--- MSE: 0.0722721358, Hyperparameter set: [4, 5, 0.1]
--- MSE: 0.0723118997, Hyperparameter set: [5, 5, 0.1]
--- MSE: 0.0727282818, Hyperparameter set: [6, 5, 0.1]
--- Optimal hyperparameter set: [4, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest outlier detection finished
Reference value definition started
--- Reference average of target time series: 11.4773826234913
--- Reference standard deviation of target time series: 1.66431731873025
Reference value definition finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0321590219, Hyperparameter set: [2, 5, 1]
--- MSE: 0.0319488318, Hyperparameter set: [3, 5, 1]
--- MSE: 0.0322191353, Hyperparameter set: [4, 5, 1]
--- MSE: 0.0324191707, Hyperparameter set: [5, 5, 1]
--- MSE: 0.032595063, Hyperparameter set: [6, 5, 1]
--- Optimal hyperparameter set: [3, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest-based gap-filling finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending finished
Time series retrieval finished
Quality-control flag determination finished
Zero-flow condition estimation started
--- dTmax calculation by the SP method started
--- dTmax calculation by the SP method finished
--- dTmax time series aggregation started
--- dTmax time series aggregation finished
Zero-flow condition estimation finished
Fd calculation process started
--- Heartwood correction was not applied
--- Fd calculation by the SP method finished
Fd calculation process finished
*** Fluxfixer finished running successfully ***
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-remove_statistical_outlier.R:32:3'): modifying short-term drifts works ──
Expected `abs(corrected[101] - 1)` < 0.1.
Actual comparison: 1000.0 >= 0.1
Difference: 999.9 >= 0
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [198s/263s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(fluxfixer)
>
> test_check("fluxfixer")
--- dTmax calculation by the SP method started
--- dTmax calculation by the SP method finished
--- dTmax calculation by the PD method started
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--- dTmax calculation by the PD and ED methods finished
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--- dTmax calculation by the PD method finished
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--- dTmax calculation by the PD method finished
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--- dTmax calculation by the PD method finished
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--- dTmax calculation by the MW and DR methods finished
Zero-flow condition estimation started
--- dTmax calculation by the SP method started
--- dTmax calculation by the SP method finished
--- dTmax calculation by the PD and ED methods started
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--- dTmax calculation by the PD and ED methods finished
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--- dTmax calculation by the MW and DR methods finished
--- dTmax time series aggregation started
--- dTmax time series aggregation finished
Zero-flow condition estimation finished
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1155032912, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1157711388, Hyperparameter set: [3, 5, 0.1]
Random forest outlier detection started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.116118315, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1164037447, Hyperparameter set: [3, 5, 0.1]
--- Optimal hyperparameter set: [2, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest outlier detection finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1176580164, Hyperparameter set: [2, 5, 1]
--- MSE: 0.1187078861, Hyperparameter set: [3, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest-based gap-filling finished
Saving _problems/test-remove_statistical_outlier-30.R
Z-score outlier detection started
--- 5 Z-score outliers were detected
--- 1 Z-score outlier was detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending was not applied
Time series retrieval finished
*** Fluxfixer started running ***
Manual error value removal was not applied
Absolute limits test finished
Short-term drift correction finished
High frequency noise filtering was not applied
Z-score outlier detection started
--- 4 Z-score outliers were detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Random forest outlier detection started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0738723153, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.0728156744, Hyperparameter set: [3, 5, 0.1]
--- MSE: 0.0722560085, Hyperparameter set: [4, 5, 0.1]
--- MSE: 0.0722657316, Hyperparameter set: [5, 5, 0.1]
--- MSE: 0.072790208, Hyperparameter set: [6, 5, 0.1]
--- Optimal hyperparameter set: [4, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest outlier detection finished
Reference value definition started
--- Reference average of target time series: 11.4773826234913
--- Reference standard deviation of target time series: 1.66431731873025
Reference value definition finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0320510997, Hyperparameter set: [2, 5, 1]
--- MSE: 0.0322984728, Hyperparameter set: [3, 5, 1]
--- MSE: 0.0323055008, Hyperparameter set: [4, 5, 1]
--- MSE: 0.0325841009, Hyperparameter set: [5, 5, 1]
--- MSE: 0.0330064573, Hyperparameter set: [6, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest-based gap-filling finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending finished
Time series retrieval finished
Quality-control flag determination finished
Zero-flow condition estimation started
--- dTmax calculation by the SP method started
--- dTmax calculation by the SP method finished
--- dTmax time series aggregation started
--- dTmax time series aggregation finished
Zero-flow condition estimation finished
Fd calculation process started
--- Heartwood correction was not applied
--- Fd calculation by the SP method finished
Fd calculation process finished
*** Fluxfixer finished running successfully ***
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-remove_statistical_outlier.R:28:3'): modifying short-term drifts works ──
Error in `data.frame(time = vctr_time, dT = vctr_target, dT_mod = vctr_target)`: arguments imply differing number of rows: 299, 300
Backtrace:
▆
1. └─fluxfixer::modify_short_drift(...) at test-remove_statistical_outlier.R:28:3
2. └─base::data.frame(time = vctr_time, dT = vctr_target, dT_mod = vctr_target)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.