Last updated on 2025-11-19 13:50:04 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.2 | 2.49 | 42.60 | 45.09 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.2 | 2.10 | 32.40 | 34.50 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.2 | 66.56 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.2 | 79.42 | ERROR | |||
| r-devel-windows-x86_64 | 0.1.2 | 7.00 | 59.00 | 66.00 | ERROR | |
| r-patched-linux-x86_64 | 0.1.2 | 3.03 | 38.03 | 41.06 | ERROR | |
| r-release-linux-x86_64 | 0.1.2 | 2.28 | 38.64 | 40.92 | ERROR | |
| r-release-macos-arm64 | 0.1.2 | OK | ||||
| r-release-macos-x86_64 | 0.1.2 | 3.00 | 55.00 | 58.00 | OK | |
| r-release-windows-x86_64 | 0.1.2 | 4.00 | 57.00 | 61.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.1.2 | OK | ||||
| r-oldrel-macos-x86_64 | 0.1.2 | 2.00 | 42.00 | 44.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.2 | 6.00 | 70.00 | 76.00 | ERROR |
Version: 0.1.2
Check: examples
Result: ERROR
Running examples in ‘doseminer-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: extract_from_prescription
> ### Title: Extract dosage information from free-text English-language
> ### prescriptions
> ### Aliases: extract_from_prescription
>
> ### ** Examples
>
> extract_from_prescription(example_prescriptions)
Error in `str_replace_all()`:
! `replacement` function must return a vector the same length as the
input (8), not length 1.
Backtrace:
▆
1. ├─doseminer::extract_from_prescription(example_prescriptions)
2. │ └─... %>% ...
3. ├─stringr::str_replace_all(...)
4. │ └─stringr:::check_lengths(string, pattern, replacement)
5. │ └─vctrs::vec_size_common(...)
6. ├─stringr::str_replace_all(...)
7. │ └─stringr:::check_lengths(string, pattern, replacement)
8. │ └─vctrs::vec_size_common(...)
9. ├─stringr::str_replace_all(., "[0-9]+ / week", weekly_to_daily)
10. │ └─stringr:::str_transform_all(string, pattern, replacement)
11. │ └─stringr::str_locate_all(string, pattern)
12. │ └─stringr:::check_lengths(string, pattern)
13. │ └─vctrs::vec_size_common(...)
14. ├─stringr::str_replace_all(...)
15. │ └─stringr:::check_lengths(string, pattern, replacement)
16. │ └─vctrs::vec_size_common(...)
17. ├─stringr::str_replace_all(...)
18. │ └─stringr:::check_lengths(string, pattern, replacement)
19. │ └─vctrs::vec_size_common(...)
20. ├─stringr::str_replace_all(., "(?:every|per) week|weekly", "every 7 days")
21. │ └─stringr:::check_lengths(string, pattern, replacement)
22. │ └─vctrs::vec_size_common(...)
23. ├─stringr::str_replace_all(...)
24. │ └─stringr:::check_lengths(string, pattern, replacement)
25. │ └─vctrs::vec_size_common(...)
26. ├─stringr::str_replace_all(...)
27. │ └─stringr:::check_lengths(string, pattern, replacement)
28. │ └─vctrs::vec_size_common(...)
29. ├─stringr::str_replace_all(...)
30. │ └─stringr:::check_lengths(string, pattern, replacement)
31. │ └─vctrs::vec_size_common(...)
32. ├─stringr::str_replace_all(., "times(?:/| a| per) ?", "/ ")
33. │ └─stringr:::check_lengths(string, pattern, replacement)
34. │ └─vctrs::vec_size_common(...)
35. ├─stringr::str_replace_all(...)
36. │ └─stringi::stri_replace_all_regex(...)
37. └─stringr::str_replace_all(...)
38. └─stringr:::str_transform_all(string, pattern, replacement)
39. └─cli::cli_abort(...)
40. └─rlang::abort(...)
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.1.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘case_study.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘case_study.Rmd’
--- re-building ‘introduction.Rmd’ using rmarkdown
Quitting from introduction.Rmd:84-86 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
`replacement` function must return a vector the same length as the input
(8), not length 1.
--- failed re-building ‘introduction.Rmd’
SUMMARY: processing the following file failed:
‘introduction.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.1.2
Check: examples
Result: ERROR
Running examples in ‘doseminer-Ex.R’ failed
The error most likely occurred in:
> ### Name: extract_from_prescription
> ### Title: Extract dosage information from free-text English-language
> ### prescriptions
> ### Aliases: extract_from_prescription
>
> ### ** Examples
>
> extract_from_prescription(example_prescriptions)
Error in `str_replace_all()`:
! `replacement` function must return a vector the same length as the
input (8), not length 1.
Backtrace:
▆
1. ├─doseminer::extract_from_prescription(example_prescriptions)
2. │ └─... %>% ...
3. ├─stringr::str_replace_all(...)
4. │ └─stringr:::check_lengths(string, pattern, replacement)
5. │ └─vctrs::vec_size_common(...)
6. ├─stringr::str_replace_all(...)
7. │ └─stringr:::check_lengths(string, pattern, replacement)
8. │ └─vctrs::vec_size_common(...)
9. ├─stringr::str_replace_all(., "[0-9]+ / week", weekly_to_daily)
10. │ └─stringr:::str_transform_all(string, pattern, replacement)
11. │ └─stringr::str_locate_all(string, pattern)
12. │ └─stringr:::check_lengths(string, pattern)
13. │ └─vctrs::vec_size_common(...)
14. ├─stringr::str_replace_all(...)
15. │ └─stringr:::check_lengths(string, pattern, replacement)
16. │ └─vctrs::vec_size_common(...)
17. ├─stringr::str_replace_all(...)
18. │ └─stringr:::check_lengths(string, pattern, replacement)
19. │ └─vctrs::vec_size_common(...)
20. ├─stringr::str_replace_all(., "(?:every|per) week|weekly", "every 7 days")
21. │ └─stringr:::check_lengths(string, pattern, replacement)
22. │ └─vctrs::vec_size_common(...)
23. ├─stringr::str_replace_all(...)
24. │ └─stringr:::check_lengths(string, pattern, replacement)
25. │ └─vctrs::vec_size_common(...)
26. ├─stringr::str_replace_all(...)
27. │ └─stringr:::check_lengths(string, pattern, replacement)
28. │ └─vctrs::vec_size_common(...)
29. ├─stringr::str_replace_all(...)
30. │ └─stringr:::check_lengths(string, pattern, replacement)
31. │ └─vctrs::vec_size_common(...)
32. ├─stringr::str_replace_all(., "times(?:/| a| per) ?", "/ ")
33. │ └─stringr:::check_lengths(string, pattern, replacement)
34. │ └─vctrs::vec_size_common(...)
35. ├─stringr::str_replace_all(...)
36. │ └─stringi::stri_replace_all_regex(...)
37. └─stringr::str_replace_all(...)
38. └─stringr:::str_transform_all(string, pattern, replacement)
39. └─cli::cli_abort(...)
40. └─rlang::abort(...)
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 0.1.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘case_study.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘case_study.Rmd’
--- re-building ‘introduction.Rmd’ using rmarkdown
Quitting from introduction.Rmd:84-86 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
`replacement` function must return a vector the same length as the input
(8), not length 1.
--- failed re-building ‘introduction.Rmd’
SUMMARY: processing the following file failed:
‘introduction.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.1.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'case_study.Rmd' using rmarkdown
--- finished re-building 'case_study.Rmd'
--- re-building 'introduction.Rmd' using rmarkdown
Quitting from introduction.Rmd:84-86 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
`replacement` function must return a vector the same length as the input
(8), not length 1.
--- failed re-building 'introduction.Rmd'
SUMMARY: processing the following file failed:
'introduction.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.