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Last updated on 2026-07-02 00:58:55 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 4.98 | 126.02 | 131.00 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 11.00 | 367.90 | 378.90 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 12.00 | 370.98 | 382.98 | OK | |
| r-devel-windows-x86_64 | 0.1.0 | 12.00 | 224.00 | 236.00 | OK | |
| r-patched-linux-x86_64 | 0.1.0 | 6.07 | 180.13 | 186.20 | OK | |
| r-release-macos-arm64 | 0.1.0 | 2.00 | 80.00 | 82.00 | OK | |
| r-release-macos-x86_64 | 0.1.0 | 5.00 | 189.00 | 194.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.1.0 | 1.00 | 61.00 | 62.00 | OK | |
| r-oldrel-macos-x86_64 | 0.1.0 | 5.00 | 170.00 | 175.00 | ERROR | |
| r-oldrel-windows-x86_64 | 0.1.0 | 14.00 | 288.00 | 302.00 | OK |
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [61s/71s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(clim4health)
>
> test_check("clim4health")
Variables found in 'path' are: 't2m'. Requested variables are: 't2m'.
'crs' is not provided. Assuming WGS 84 (EPSG:4326) for gridded data.
Variables found in 'path' are: 't2m'. Requested variables are: 't2m'.
Variables found in 'path' are: 't2m'. Requested variables are: 't2m'.
'crs' is not provided. Assuming WGS 84 (EPSG:4326) for gridded data.
Linking to GEOS 3.14.1, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
terra 1.9.34
Attaching package: 'terra'
The following objects are masked from 'package:testthat':
compare, describe
The 'exp' s2dv_cube object has been aggregated to regions and has an 'area' dimension. Only bias adjustment or calibration will be applied, no spatial downscaling.
Note: If using 'Intbc' and 'points' is not specified, downscaling is to a grid. 'target_grid' has not been specified. Downscaling will be done to the grid of 'obs'.
Note: If using 'Intbc' and 'points' is not specified, downscaling is to a grid. 'target_grid' has not been specified. Downscaling will be done to the grid of 'obs'.
Note: If using 'Intlr' and 'points' is not specified, downscaling is to a grid. 'target_grid' has not been specified. Downscaling will be done to the grid of 'obs'.
[1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/ERA5.land..April.data_2025_04_202504.nc"
[1] "Loaded 4-2025: took 0.00364303588867188"
[1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/ERA5.land..April.data_2025_04_202504.nc"
[1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/hindcast_201004.nc"
[1] "Loaded 4-2010: took 0.0036160945892334"
[1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/hindcast_201004.nc"
[1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/hindcast_201104.nc"
[1] "Loaded 4-2011: took 0.00362610816955566"
[1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/hindcast_201104.nc"
[1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/hindcast_201204.nc"
[1] "Loaded 4-2012: took 0.00354695320129395"
[1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/hindcast_201204.nc"
- test-dataset-1
- test-dataset-2
Available climate datasets:
- product_type
- variable
Required parameters:
Variables found in 'path' are: 't2m'. Requested variables are: 'invalid_var'.
Requested variable 'invalid_var' not found in 'path'. Skipping.
Variables found in 'path' are: 't2m'. Requested variables are: 't2m'.
Aggregating ensemble members with the function: mean
Spherical geometry (s2) switched off
Coordinate system already present.
i Adding new coordinate system, which will replace the existing one.
Variables found in 'path' are: 't2m'. Requested variables are: 't2m'.
The provided areas are not in WGS84 (EPSG: 4326). They will be transformed into that CRS to perfom the spatial aggregation
'crs' is not provided. Assuming WGS 84 (EPSG:4326) for gridded data.
'crs' is not provided. Taking CRS from the input data if available.
Time zone in the input data is empty. Assuming system timezone: America/New_York
Time zone in the input data is empty. Assuming system timezone: America/New_York
Saving _problems/test-c4h_time-91.R
Time zone in the input data is empty. Assuming system timezone: America/New_York
Saving _problems/test-c4h_time-101.R
Requested variable 'dummy' not found in 'path'. Skipping.
[ FAIL 2 | WARN 37 | SKIP 8 | PASS 543 ]
══ Skipped tests (8) ═══════════════════════════════════════════════════════════
• On CRAN (8): 'test-c4h_downscale.R:255:3', 'test-c4h_downscale.R:277:3',
'test-c4h_downscale.R:300:3', 'test-c4h_downscale.R:311:3',
'test-c4h_downscale.R:347:3', 'test-c4h_downscale.R:384:3',
'test-utils-load.R:654:3', 'test-utils-load.R:792:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-c4h_time.R:54:3'): Time examples run without problems ────────
Expected `{ ... }` not to throw any errors.
Actually got a <expectation_failure> with message:
Expected `dim(stat_month$data)[["sdate"]]` to equal 3.
Differences:
`actual`: 6.0
`expected`: 3.0
── Failure ('test-c4h_time.R:101:3'): Time examples run without problems ───────
Expected `dim(stat_daily$data)[["time"]]` to equal 1116.
Differences:
`actual`: 1147.0
`expected`: 1116.0
[ FAIL 2 | WARN 37 | SKIP 8 | PASS 543 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [50s/50s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(clim4health)
>
> test_check("clim4health")
Variables found in 'path' are: 't2m'. Requested variables are: 't2m'.
'crs' is not provided. Assuming WGS 84 (EPSG:4326) for gridded data.
Variables found in 'path' are: 't2m'. Requested variables are: 't2m'.
Variables found in 'path' are: 't2m'. Requested variables are: 't2m'.
'crs' is not provided. Assuming WGS 84 (EPSG:4326) for gridded data.
Linking to GEOS 3.14.1, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
terra 1.9.34
Attaching package: 'terra'
The following objects are masked from 'package:testthat':
compare, describe
The 'exp' s2dv_cube object has been aggregated to regions and has an 'area' dimension. Only bias adjustment or calibration will be applied, no spatial downscaling.
Note: If using 'Intbc' and 'points' is not specified, downscaling is to a grid. 'target_grid' has not been specified. Downscaling will be done to the grid of 'obs'.
Note: If using 'Intbc' and 'points' is not specified, downscaling is to a grid. 'target_grid' has not been specified. Downscaling will be done to the grid of 'obs'.
Note: If using 'Intlr' and 'points' is not specified, downscaling is to a grid. 'target_grid' has not been specified. Downscaling will be done to the grid of 'obs'.
[1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/ERA5.land..April.data_2025_04_202504.nc"
[1] "Loaded 4-2025: took 0.00401496887207031"
[1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/ERA5.land..April.data_2025_04_202504.nc"
[1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/hindcast_201004.nc"
[1] "Loaded 4-2010: took 0.00347900390625"
[1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/hindcast_201004.nc"
[1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/hindcast_201104.nc"
[1] "Loaded 4-2011: took 0.0035400390625"
[1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/hindcast_201104.nc"
[1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/hindcast_201204.nc"
[1] "Loaded 4-2012: took 0.00331783294677734"
[1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/hindcast_201204.nc"
- test-dataset-1
- test-dataset-2
Available climate datasets:
- product_type
- variable
Required parameters:
Variables found in 'path' are: 't2m'. Requested variables are: 'invalid_var'.
Requested variable 'invalid_var' not found in 'path'. Skipping.
Variables found in 'path' are: 't2m'. Requested variables are: 't2m'.
Aggregating ensemble members with the function: mean
Spherical geometry (s2) switched off
Coordinate system already present.
i Adding new coordinate system, which will replace the existing one.
Variables found in 'path' are: 't2m'. Requested variables are: 't2m'.
The provided areas are not in WGS84 (EPSG: 4326). They will be transformed into that CRS to perfom the spatial aggregation
'crs' is not provided. Assuming WGS 84 (EPSG:4326) for gridded data.
'crs' is not provided. Taking CRS from the input data if available.
Time zone in the input data is empty. Assuming system timezone: America/New_York
Time zone in the input data is empty. Assuming system timezone: America/New_York
Saving _problems/test-c4h_time-91.R
Time zone in the input data is empty. Assuming system timezone: America/New_York
Saving _problems/test-c4h_time-101.R
Requested variable 'dummy' not found in 'path'. Skipping.
[ FAIL 2 | WARN 37 | SKIP 8 | PASS 543 ]
══ Skipped tests (8) ═══════════════════════════════════════════════════════════
• On CRAN (8): 'test-c4h_downscale.R:255:3', 'test-c4h_downscale.R:277:3',
'test-c4h_downscale.R:300:3', 'test-c4h_downscale.R:311:3',
'test-c4h_downscale.R:347:3', 'test-c4h_downscale.R:384:3',
'test-utils-load.R:654:3', 'test-utils-load.R:792:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-c4h_time.R:54:3'): Time examples run without problems ────────
Expected `{ ... }` not to throw any errors.
Actually got a <expectation_failure> with message:
Expected `dim(stat_month$data)[["sdate"]]` to equal 3.
Differences:
`actual`: 6.0
`expected`: 3.0
── Failure ('test-c4h_time.R:101:3'): Time examples run without problems ───────
Expected `dim(stat_daily$data)[["time"]]` to equal 1116.
Differences:
`actual`: 1147.0
`expected`: 1116.0
[ FAIL 2 | WARN 37 | SKIP 8 | PASS 543 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
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They may not be fully stable and should be used with caution. We make no claims about them.
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