CRAN Package Check Results for Package FORTLS

Last updated on 2026-02-08 19:51:13 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	1.6.2	53.71	563.66	617.37	ERROR
r-devel-linux-x86_64-debian-gcc	1.6.2	37.11	359.60	396.71	ERROR
r-devel-linux-x86_64-fedora-clang	1.6.2	111.00	953.99	1064.99	ERROR
r-devel-linux-x86_64-fedora-gcc	1.6.2	103.00	945.40	1048.40	ERROR
r-devel-windows-x86_64	1.6.2	70.00	731.00	801.00	ERROR
r-patched-linux-x86_64	1.6.2	57.79	561.33	619.12	ERROR
r-release-linux-x86_64	1.6.2	53.63	546.07	599.70	ERROR
r-release-macos-arm64	1.6.2	11.00	129.00	140.00	OK
r-release-macos-x86_64	1.6.2	34.00	414.00	448.00	OK
r-release-windows-x86_64	1.6.2	74.00	826.00	900.00	OK
r-oldrel-macos-arm64	1.6.2	10.00	132.00	142.00	NOTE
r-oldrel-macos-x86_64	1.6.2	35.00	590.00	625.00	NOTE
r-oldrel-windows-x86_64	1.6.2	82.00	729.00	811.00	ERROR

Additional issues

donttest

Check Details

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘plot_design_optimization.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘plot_design_optimization.Rmd’ --- re-building ‘stand_level.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘stand_level.Rmd’ --- re-building ‘tree_level.Rmd’ using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building ‘tree_level.Rmd’ SUMMARY: processing the following file failed: ‘tree_level.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘plot_design_optimization.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘plot_design_optimization.Rmd’ --- re-building ‘stand_level.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘stand_level.Rmd’ --- re-building ‘tree_level.Rmd’ using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building ‘tree_level.Rmd’ SUMMARY: processing the following file failed: ‘tree_level.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘plot_design_optimization.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /data/gannet/ripley/R/packages/tests-clang/FORTLS.Rcheck/FORTLS/data (probably via setwd()). It will be restored to /data/gannet/ripley/R/packages/tests-clang/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘plot_design_optimization.Rmd’ --- re-building ‘stand_level.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /data/gannet/ripley/R/packages/tests-clang/FORTLS.Rcheck/FORTLS/data (probably via setwd()). It will be restored to /data/gannet/ripley/R/packages/tests-clang/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘stand_level.Rmd’ --- re-building ‘tree_level.Rmd’ using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building ‘tree_level.Rmd’ SUMMARY: processing the following file failed: ‘tree_level.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘plot_design_optimization.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /data/gannet/ripley/R/packages/tests-devel/FORTLS.Rcheck/FORTLS/data (probably via setwd()). It will be restored to /data/gannet/ripley/R/packages/tests-devel/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘plot_design_optimization.Rmd’ --- re-building ‘stand_level.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /data/gannet/ripley/R/packages/tests-devel/FORTLS.Rcheck/FORTLS/data (probably via setwd()). It will be restored to /data/gannet/ripley/R/packages/tests-devel/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘stand_level.Rmd’ --- re-building ‘tree_level.Rmd’ using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building ‘tree_level.Rmd’ SUMMARY: processing the following file failed: ‘tree_level.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'plot_design_optimization.Rmd' using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to D:/temp/2026_02_05_01_50_00_2357/Rtmp6Hjwh3/RLIBS_ae7c7382870/FORTLS/data (probably via setwd()). It will be restored to D:/RCompile/CRANpkg/local/4.6/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit --- finished re-building 'plot_design_optimization.Rmd' --- re-building 'stand_level.Rmd' using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to D:/temp/2026_02_05_01_50_00_2357/Rtmp6Hjwh3/RLIBS_ae7c7382870/FORTLS/data (probably via setwd()). It will be restored to D:/RCompile/CRANpkg/local/4.6/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit --- finished re-building 'stand_level.Rmd' --- re-building 'tree_level.Rmd' using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building 'tree_level.Rmd' SUMMARY: processing the following file failed: 'tree_level.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-devel-windows-x86_64

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘plot_design_optimization.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘plot_design_optimization.Rmd’ --- re-building ‘stand_level.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘stand_level.Rmd’ --- re-building ‘tree_level.Rmd’ using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building ‘tree_level.Rmd’ SUMMARY: processing the following file failed: ‘tree_level.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-patched-linux-x86_64

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘plot_design_optimization.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘plot_design_optimization.Rmd’ --- re-building ‘stand_level.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘stand_level.Rmd’ --- re-building ‘tree_level.Rmd’ using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building ‘tree_level.Rmd’ SUMMARY: processing the following file failed: ‘tree_level.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-linux-x86_64

Version: 1.6.2
Check: installed package size
Result: NOTE installed size is 9.0Mb sub-directories of 1Mb or more: data 2.7Mb doc 1.2Mb libs 4.3Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'plot_design_optimization.Rmd' using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to D:/temp/2026_02_04_01_50_01_15123/RtmpecvxAh/RLIBS_11f5c57c25320/FORTLS/data (probably via setwd()). It will be restored to D:/RCompile/CRANpkg/local/4.4/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit --- finished re-building 'plot_design_optimization.Rmd' --- re-building 'stand_level.Rmd' using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to D:/temp/2026_02_04_01_50_01_15123/RtmpecvxAh/RLIBS_11f5c57c25320/FORTLS/data (probably via setwd()). It will be restored to D:/RCompile/CRANpkg/local/4.4/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit --- finished re-building 'stand_level.Rmd' --- re-building 'tree_level.Rmd' using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building 'tree_level.Rmd' SUMMARY: processing the following file failed: 'tree_level.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-windows-x86_64