Connectivity-Weighted Allocation and Comparison of Field-Plot Designs


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Documentation for package ‘cwad’ version 0.2.0

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balanced_control Neutral integer-feasible control allocation
blup BLUP of genotype effects from the reduced (means) model
build_mme Reduced mixed-model coefficient matrix on genotype means
compare_designs Crossed comparison of allocations and analysis models
greedy_alloc Greedy A-optimal, connectivity-aware plot allocation
make_fs_G Full-sib additive relationship matrix
Muu_inv u-block of the inverse MME (unit-variance scale)
pev_pairwise Mean pairwise prediction-error variance (A-optimality criterion)
reliability Mean genotype reliability
sim_transgressive Transgressive-segregant shrinkage experiment, with matched controls
sim_wrongG Wrong-kinship breaking-point experiment, with matched controls